Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 BX842568.3-201ENST00000418104 571 ntBASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 ZNRF2P3-201ENST00000424200 374 ntBASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 AC233992.3-201ENST00000607491 485 ntBASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RAB40AQ8WXH6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.4■□□□□ 0.54
RAB40AQ8WXH6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40AQ8WXH6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB40AQ8WXH6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40AQ8WXH6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.4■□□□□ 0.54
RAB40AQ8WXH6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40AQ8WXH6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40AQ8WXH6 AC105265.2-201ENST00000467189 838 ntBASIC18.4■□□□□ 0.54
RAB40AQ8WXH6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.4■□□□□ 0.54
RAB40AQ8WXH6 AL499627.2-201ENST00000606283 725 ntBASIC18.4■□□□□ 0.54
RAB40AQ8WXH6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RAB40AQ8WXH6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40AQ8WXH6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40AQ8WXH6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40AQ8WXH6 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RAB40AQ8WXH6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RAB40AQ8WXH6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RAB40AQ8WXH6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RAB40AQ8WXH6 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40AQ8WXH6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB40AQ8WXH6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40AQ8WXH6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB40AQ8WXH6 AC099791.1-201ENST00000416440 715 ntBASIC18.39■□□□□ 0.53
RAB40AQ8WXH6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40AQ8WXH6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.39■□□□□ 0.53
RAB40AQ8WXH6 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.39■□□□□ 0.53
RAB40AQ8WXH6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.39■□□□□ 0.53
RAB40AQ8WXH6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40AQ8WXH6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40AQ8WXH6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40AQ8WXH6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RAB40AQ8WXH6 AC026471.6-201ENST00000622954 1905 ntBASIC18.39■□□□□ 0.53
RAB40AQ8WXH6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40AQ8WXH6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
RAB40AQ8WXH6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RAB40AQ8WXH6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.39■□□□□ 0.53
RAB40AQ8WXH6 AC133637.1-201ENST00000624115 1537 ntBASIC18.39■□□□□ 0.53
RAB40AQ8WXH6 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RAB40AQ8WXH6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB40AQ8WXH6 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB40AQ8WXH6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB40AQ8WXH6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB40AQ8WXH6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB40AQ8WXH6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB40AQ8WXH6 AC079089.2-201ENST00000531211 1277 ntBASIC18.38■□□□□ 0.53
RAB40AQ8WXH6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.38■□□□□ 0.53
RAB40AQ8WXH6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB40AQ8WXH6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.38■□□□□ 0.53
RAB40AQ8WXH6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RAB40AQ8WXH6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RAB40AQ8WXH6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
RAB40AQ8WXH6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
RAB40AQ8WXH6 AL049796.1-201ENST00000565336 1766 ntBASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB40AQ8WXH6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms