Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB1Q8WWH5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB1Q8WWH5 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB1Q8WWH5 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB1Q8WWH5 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB1Q8WWH5 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB1Q8WWH5 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TRUB1Q8WWH5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
TRUB1Q8WWH5 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRUB1Q8WWH5 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRUB1Q8WWH5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.22■□□□□ 0.67
TRUB1Q8WWH5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRUB1Q8WWH5 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRUB1Q8WWH5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRUB1Q8WWH5 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRUB1Q8WWH5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.22■□□□□ 0.67
TRUB1Q8WWH5 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRUB1Q8WWH5 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRUB1Q8WWH5 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRUB1Q8WWH5 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRUB1Q8WWH5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.22■□□□□ 0.67
TRUB1Q8WWH5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRUB1Q8WWH5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB1Q8WWH5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.21■□□□□ 0.67
TRUB1Q8WWH5 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB1Q8WWH5 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB1Q8WWH5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
TRUB1Q8WWH5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.21■□□□□ 0.67
TRUB1Q8WWH5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB1Q8WWH5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TRUB1Q8WWH5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRUB1Q8WWH5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB1Q8WWH5 KRT125P-201ENST00000546827 989 ntBASIC19.21■□□□□ 0.67
TRUB1Q8WWH5 AL033527.3-201ENST00000566366 1196 ntBASIC19.21■□□□□ 0.67
TRUB1Q8WWH5 Z92544.1-202ENST00000571933 1220 ntBASIC19.21■□□□□ 0.67
TRUB1Q8WWH5 AL451085.2-201ENST00000605085 799 ntBASIC19.21■□□□□ 0.67
TRUB1Q8WWH5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
TRUB1Q8WWH5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
TRUB1Q8WWH5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB1Q8WWH5 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB1Q8WWH5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB1Q8WWH5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.21■□□□□ 0.67
TRUB1Q8WWH5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB1Q8WWH5 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRUB1Q8WWH5 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB1Q8WWH5 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
TRUB1Q8WWH5 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.2■□□□□ 0.66
TRUB1Q8WWH5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB1Q8WWH5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRUB1Q8WWH5 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB1Q8WWH5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.2■□□□□ 0.66
TRUB1Q8WWH5 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.2■□□□□ 0.66
TRUB1Q8WWH5 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.2■□□□□ 0.66
TRUB1Q8WWH5 AL034346.1-201ENST00000568244 1277 ntBASIC19.2■□□□□ 0.66
TRUB1Q8WWH5 AC087239.1-201ENST00000622671 572 ntBASIC19.2■□□□□ 0.66
TRUB1Q8WWH5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB1Q8WWH5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB1Q8WWH5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB1Q8WWH5 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRUB1Q8WWH5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB1Q8WWH5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB1Q8WWH5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB1Q8WWH5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB1Q8WWH5 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB1Q8WWH5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRUB1Q8WWH5 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TRUB1Q8WWH5 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB1Q8WWH5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB1Q8WWH5 BX323043.1-201ENST00000641006 1765 ntBASIC19.19■□□□□ 0.66
TRUB1Q8WWH5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB1Q8WWH5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB1Q8WWH5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.19■□□□□ 0.66
TRUB1Q8WWH5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.19■□□□□ 0.66
TRUB1Q8WWH5 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB1Q8WWH5 AC010997.5-201ENST00000609182 354 ntBASIC19.19■□□□□ 0.66
TRUB1Q8WWH5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB1Q8WWH5 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.19■□□□□ 0.66
TRUB1Q8WWH5 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB1Q8WWH5 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB1Q8WWH5 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRUB1Q8WWH5 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRUB1Q8WWH5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.18■□□□□ 0.66
TRUB1Q8WWH5 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRUB1Q8WWH5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRUB1Q8WWH5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRUB1Q8WWH5 GABARAPL3-202ENST00000624044 1851 ntBASIC19.18■□□□□ 0.66
TRUB1Q8WWH5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRUB1Q8WWH5 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
TRUB1Q8WWH5 AC018445.3-201ENST00000624177 1945 ntBASIC19.18■□□□□ 0.66
TRUB1Q8WWH5 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.18■□□□□ 0.66
TRUB1Q8WWH5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRUB1Q8WWH5 AL117332.1-201ENST00000622628 974 ntBASIC19.18■□□□□ 0.66
TRUB1Q8WWH5 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
TRUB1Q8WWH5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRUB1Q8WWH5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRUB1Q8WWH5 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.18■□□□□ 0.66
TRUB1Q8WWH5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRUB1Q8WWH5 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRUB1Q8WWH5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TRUB1Q8WWH5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms