Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTCD2Q8WV60 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTCD2Q8WV60 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTCD2Q8WV60 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTCD2Q8WV60 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTCD2Q8WV60 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.28■■□□□ 1
PTCD2Q8WV60 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.28■■□□□ 1
PTCD2Q8WV60 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTCD2Q8WV60 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PTCD2Q8WV60 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.28■■□□□ 1
PTCD2Q8WV60 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTCD2Q8WV60 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PTCD2Q8WV60 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.28■■□□□ 1
PTCD2Q8WV60 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTCD2Q8WV60 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PTCD2Q8WV60 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.28■■□□□ 1
PTCD2Q8WV60 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.28■■□□□ 1
PTCD2Q8WV60 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PTCD2Q8WV60 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PTCD2Q8WV60 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
PTCD2Q8WV60 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PTCD2Q8WV60 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.27■■□□□ 1
PTCD2Q8WV60 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.27■■□□□ 1
PTCD2Q8WV60 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PTCD2Q8WV60 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.27■■□□□ 1
PTCD2Q8WV60 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PTCD2Q8WV60 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.27■■□□□ 1
PTCD2Q8WV60 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.27■■□□□ 1
PTCD2Q8WV60 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.27■■□□□ 1
PTCD2Q8WV60 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.27■■□□□ 1
PTCD2Q8WV60 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.27■■□□□ 1
PTCD2Q8WV60 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.27■■□□□ 1
PTCD2Q8WV60 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.27■■□□□ 1
PTCD2Q8WV60 AC004854.2-201ENST00000608450 1441 ntBASIC21.27■■□□□ 1
PTCD2Q8WV60 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PTCD2Q8WV60 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PTCD2Q8WV60 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PTCD2Q8WV60 AC005229.4-201ENST00000610085 2198 ntBASIC21.27■■□□□ 1
PTCD2Q8WV60 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PTCD2Q8WV60 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTCD2Q8WV60 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PTCD2Q8WV60 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PTCD2Q8WV60 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTCD2Q8WV60 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.26■□□□□ 0.99
PTCD2Q8WV60 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.26■□□□□ 0.99
PTCD2Q8WV60 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTCD2Q8WV60 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTCD2Q8WV60 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTCD2Q8WV60 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.26■□□□□ 0.99
PTCD2Q8WV60 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PTCD2Q8WV60 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.26■□□□□ 0.99
PTCD2Q8WV60 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PTCD2Q8WV60 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTCD2Q8WV60 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTCD2Q8WV60 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTCD2Q8WV60 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTCD2Q8WV60 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTCD2Q8WV60 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
PTCD2Q8WV60 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.25■□□□□ 0.99
PTCD2Q8WV60 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PTCD2Q8WV60 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.25■□□□□ 0.99
PTCD2Q8WV60 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTCD2Q8WV60 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.25■□□□□ 0.99
PTCD2Q8WV60 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.25■□□□□ 0.99
PTCD2Q8WV60 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTCD2Q8WV60 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PTCD2Q8WV60 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTCD2Q8WV60 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.25■□□□□ 0.99
PTCD2Q8WV60 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PTCD2Q8WV60 AP004607.4-201ENST00000530158 1459 ntBASIC21.25■□□□□ 0.99
PTCD2Q8WV60 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTCD2Q8WV60 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PTCD2Q8WV60 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTCD2Q8WV60 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTCD2Q8WV60 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.24■□□□□ 0.99
PTCD2Q8WV60 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTCD2Q8WV60 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.24■□□□□ 0.99
PTCD2Q8WV60 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTCD2Q8WV60 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.24■□□□□ 0.99
PTCD2Q8WV60 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTCD2Q8WV60 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.24■□□□□ 0.99
PTCD2Q8WV60 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.24■□□□□ 0.99
PTCD2Q8WV60 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTCD2Q8WV60 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.24■□□□□ 0.99
PTCD2Q8WV60 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTCD2Q8WV60 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTCD2Q8WV60 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PTCD2Q8WV60 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTCD2Q8WV60 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTCD2Q8WV60 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTCD2Q8WV60 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
PTCD2Q8WV60 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.23■□□□□ 0.99
PTCD2Q8WV60 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.23■□□□□ 0.99
PTCD2Q8WV60 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.23■□□□□ 0.99
PTCD2Q8WV60 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.23■□□□□ 0.99
PTCD2Q8WV60 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.23■□□□□ 0.99
PTCD2Q8WV60 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
PTCD2Q8WV60 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTCD2Q8WV60 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.23■□□□□ 0.99
PTCD2Q8WV60 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms