Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.19■□□□□ 0.66
CNIH3Q8TBE1 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNIH3Q8TBE1 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNIH3Q8TBE1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNIH3Q8TBE1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CNIH3Q8TBE1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CNIH3Q8TBE1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
CNIH3Q8TBE1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CNIH3Q8TBE1 AC003102.1-202ENST00000563394 1796 ntBASIC19.19■□□□□ 0.66
CNIH3Q8TBE1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.18■□□□□ 0.66
CNIH3Q8TBE1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.18■□□□□ 0.66
CNIH3Q8TBE1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNIH3Q8TBE1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNIH3Q8TBE1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNIH3Q8TBE1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNIH3Q8TBE1 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
CNIH3Q8TBE1 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.18■□□□□ 0.66
CNIH3Q8TBE1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNIH3Q8TBE1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNIH3Q8TBE1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNIH3Q8TBE1 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
CNIH3Q8TBE1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CNIH3Q8TBE1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CNIH3Q8TBE1 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CNIH3Q8TBE1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.17■□□□□ 0.66
CNIH3Q8TBE1 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNIH3Q8TBE1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNIH3Q8TBE1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNIH3Q8TBE1 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.17■□□□□ 0.66
CNIH3Q8TBE1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNIH3Q8TBE1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNIH3Q8TBE1 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.17■□□□□ 0.66
CNIH3Q8TBE1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNIH3Q8TBE1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNIH3Q8TBE1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNIH3Q8TBE1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CNIH3Q8TBE1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNIH3Q8TBE1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNIH3Q8TBE1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNIH3Q8TBE1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNIH3Q8TBE1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CNIH3Q8TBE1 AC021242.3-201ENST00000607598 1377 ntBASIC19.17■□□□□ 0.66
CNIH3Q8TBE1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNIH3Q8TBE1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNIH3Q8TBE1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CNIH3Q8TBE1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNIH3Q8TBE1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNIH3Q8TBE1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNIH3Q8TBE1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CNIH3Q8TBE1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.16■□□□□ 0.66
CNIH3Q8TBE1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
CNIH3Q8TBE1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.16■□□□□ 0.66
CNIH3Q8TBE1 AL033527.3-201ENST00000566366 1196 ntBASIC19.16■□□□□ 0.66
CNIH3Q8TBE1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CNIH3Q8TBE1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.16■□□□□ 0.66
CNIH3Q8TBE1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNIH3Q8TBE1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CNIH3Q8TBE1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.16■□□□□ 0.66
CNIH3Q8TBE1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNIH3Q8TBE1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNIH3Q8TBE1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CNIH3Q8TBE1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH3Q8TBE1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH3Q8TBE1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.15■□□□□ 0.66
CNIH3Q8TBE1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH3Q8TBE1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH3Q8TBE1 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CNIH3Q8TBE1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH3Q8TBE1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CNIH3Q8TBE1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.15■□□□□ 0.66
CNIH3Q8TBE1 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.15■□□□□ 0.66
CNIH3Q8TBE1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.15■□□□□ 0.66
CNIH3Q8TBE1 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH3Q8TBE1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH3Q8TBE1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH3Q8TBE1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH3Q8TBE1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH3Q8TBE1 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CNIH3Q8TBE1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CNIH3Q8TBE1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CNIH3Q8TBE1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNIH3Q8TBE1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNIH3Q8TBE1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.14■□□□□ 0.65
CNIH3Q8TBE1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.14■□□□□ 0.65
CNIH3Q8TBE1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.14■□□□□ 0.65
CNIH3Q8TBE1 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNIH3Q8TBE1 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNIH3Q8TBE1 KRT8P33-201ENST00000508125 1423 ntBASIC19.14■□□□□ 0.65
CNIH3Q8TBE1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNIH3Q8TBE1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNIH3Q8TBE1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNIH3Q8TBE1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.14■□□□□ 0.65
CNIH3Q8TBE1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNIH3Q8TBE1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNIH3Q8TBE1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNIH3Q8TBE1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CNIH3Q8TBE1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CNIH3Q8TBE1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CNIH3Q8TBE1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CNIH3Q8TBE1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms