Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 KRT18P14-201ENST00000534205 1250 ntBASIC20.66■□□□□ 0.9
HMGCLL1Q8TB92 AC087623.3-201ENST00000607047 1098 ntBASIC20.66■□□□□ 0.9
HMGCLL1Q8TB92 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCLL1Q8TB92 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCLL1Q8TB92 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.66■□□□□ 0.9
HMGCLL1Q8TB92 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HMGCLL1Q8TB92 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGCLL1Q8TB92 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.66■□□□□ 0.9
HMGCLL1Q8TB92 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCLL1Q8TB92 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCLL1Q8TB92 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCLL1Q8TB92 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCLL1Q8TB92 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.65■□□□□ 0.9
HMGCLL1Q8TB92 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCLL1Q8TB92 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCLL1Q8TB92 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.65■□□□□ 0.9
HMGCLL1Q8TB92 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCLL1Q8TB92 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCLL1Q8TB92 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.65■□□□□ 0.9
HMGCLL1Q8TB92 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCLL1Q8TB92 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.65■□□□□ 0.9
HMGCLL1Q8TB92 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGCLL1Q8TB92 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HMGCLL1Q8TB92 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HMGCLL1Q8TB92 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
HMGCLL1Q8TB92 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCLL1Q8TB92 MIR935-201ENST00000401179 91 ntBASIC20.64■□□□□ 0.89
HMGCLL1Q8TB92 AC034268.1-201ENST00000441047 882 ntBASIC20.64■□□□□ 0.89
HMGCLL1Q8TB92 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.64■□□□□ 0.89
HMGCLL1Q8TB92 DUX4L2-201ENST00000561772 1275 ntBASIC20.64■□□□□ 0.89
HMGCLL1Q8TB92 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCLL1Q8TB92 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.64■□□□□ 0.89
HMGCLL1Q8TB92 DUX4L6-201ENST00000626483 1275 ntBASIC20.64■□□□□ 0.89
HMGCLL1Q8TB92 DUX4L1-201ENST00000627662 1275 ntBASIC20.64■□□□□ 0.89
HMGCLL1Q8TB92 DUX4L8-201ENST00000629013 1275 ntBASIC20.64■□□□□ 0.89
HMGCLL1Q8TB92 DUX4L3-201ENST00000630187 1275 ntBASIC20.64■□□□□ 0.89
HMGCLL1Q8TB92 DUX4L7-201ENST00000630678 1275 ntBASIC20.64■□□□□ 0.89
HMGCLL1Q8TB92 DUX4L5-201ENST00000630834 1275 ntBASIC20.64■□□□□ 0.89
HMGCLL1Q8TB92 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCLL1Q8TB92 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCLL1Q8TB92 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.64■□□□□ 0.89
HMGCLL1Q8TB92 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.64■□□□□ 0.89
HMGCLL1Q8TB92 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGCLL1Q8TB92 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
HMGCLL1Q8TB92 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLL1Q8TB92 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.63■□□□□ 0.89
HMGCLL1Q8TB92 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
HMGCLL1Q8TB92 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLL1Q8TB92 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLL1Q8TB92 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLL1Q8TB92 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLL1Q8TB92 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLL1Q8TB92 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.63■□□□□ 0.89
HMGCLL1Q8TB92 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLL1Q8TB92 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.63■□□□□ 0.89
HMGCLL1Q8TB92 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
HMGCLL1Q8TB92 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLL1Q8TB92 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.63■□□□□ 0.89
HMGCLL1Q8TB92 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLL1Q8TB92 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.63■□□□□ 0.89
HMGCLL1Q8TB92 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLL1Q8TB92 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.63■□□□□ 0.89
HMGCLL1Q8TB92 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
HMGCLL1Q8TB92 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HMGCLL1Q8TB92 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
HMGCLL1Q8TB92 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLL1Q8TB92 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.62■□□□□ 0.89
HMGCLL1Q8TB92 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.62■□□□□ 0.89
HMGCLL1Q8TB92 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.62■□□□□ 0.89
HMGCLL1Q8TB92 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.62■□□□□ 0.89
HMGCLL1Q8TB92 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.62■□□□□ 0.89
HMGCLL1Q8TB92 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.62■□□□□ 0.89
HMGCLL1Q8TB92 AC079140.4-201ENST00000507448 529 ntBASIC20.62■□□□□ 0.89
HMGCLL1Q8TB92 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.62■□□□□ 0.89
HMGCLL1Q8TB92 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLL1Q8TB92 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.62■□□□□ 0.89
HMGCLL1Q8TB92 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLL1Q8TB92 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLL1Q8TB92 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.62■□□□□ 0.89
HMGCLL1Q8TB92 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
HMGCLL1Q8TB92 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.62■□□□□ 0.89
HMGCLL1Q8TB92 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLL1Q8TB92 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HMGCLL1Q8TB92 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.62■□□□□ 0.89
HMGCLL1Q8TB92 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCLL1Q8TB92 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.61■□□□□ 0.89
HMGCLL1Q8TB92 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCLL1Q8TB92 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCLL1Q8TB92 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.61■□□□□ 0.89
HMGCLL1Q8TB92 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCLL1Q8TB92 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.61■□□□□ 0.89
HMGCLL1Q8TB92 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCLL1Q8TB92 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCLL1Q8TB92 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCLL1Q8TB92 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.61■□□□□ 0.89
HMGCLL1Q8TB92 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCLL1Q8TB92 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.61■□□□□ 0.89
HMGCLL1Q8TB92 MIR5787-201ENST00000611784 55 ntBASIC20.61■□□□□ 0.89
HMGCLL1Q8TB92 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HMGCLL1Q8TB92 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms