Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 TNRC18P2-201ENST00000417666 2714 ntBASIC13.33□□□□□ -0.28
SVIPQ8NHG7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SVIPQ8NHG7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 AL049812.1-201ENST00000432563 2267 ntBASIC13.32□□□□□ -0.28
SVIPQ8NHG7 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 ALDH8A1-203ENST00000367845 2383 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SVIPQ8NHG7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 RN7SL371P-201ENST00000578099 267 ntBASIC13.31□□□□□ -0.28
SVIPQ8NHG7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC13.31□□□□□ -0.28
SVIPQ8NHG7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SVIPQ8NHG7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
SVIPQ8NHG7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms