Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNAAF1Q8NEP3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNAAF1Q8NEP3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DNAAF1Q8NEP3 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNAAF1Q8NEP3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.42■□□□□ 0.54
DNAAF1Q8NEP3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNAAF1Q8NEP3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.42■□□□□ 0.54
DNAAF1Q8NEP3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
DNAAF1Q8NEP3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DNAAF1Q8NEP3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNAAF1Q8NEP3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
DNAAF1Q8NEP3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNAAF1Q8NEP3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNAAF1Q8NEP3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.42■□□□□ 0.54
DNAAF1Q8NEP3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.42■□□□□ 0.54
DNAAF1Q8NEP3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DNAAF1Q8NEP3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNAAF1Q8NEP3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNAAF1Q8NEP3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNAAF1Q8NEP3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DNAAF1Q8NEP3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
DNAAF1Q8NEP3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.41■□□□□ 0.54
DNAAF1Q8NEP3 FEM1AP1-201ENST00000431297 1995 ntBASIC18.41■□□□□ 0.54
DNAAF1Q8NEP3 AL049796.1-201ENST00000565336 1766 ntBASIC18.41■□□□□ 0.54
DNAAF1Q8NEP3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.41■□□□□ 0.54
DNAAF1Q8NEP3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DNAAF1Q8NEP3 AP005435.1-201ENST00000529293 1178 ntBASIC18.41■□□□□ 0.54
DNAAF1Q8NEP3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.41■□□□□ 0.54
DNAAF1Q8NEP3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.41■□□□□ 0.54
DNAAF1Q8NEP3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
DNAAF1Q8NEP3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNAAF1Q8NEP3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DNAAF1Q8NEP3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
DNAAF1Q8NEP3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 AC010525.1-201ENST00000585559 441 ntBASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DNAAF1Q8NEP3 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DNAAF1Q8NEP3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
DNAAF1Q8NEP3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DNAAF1Q8NEP3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DNAAF1Q8NEP3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DNAAF1Q8NEP3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
DNAAF1Q8NEP3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
DNAAF1Q8NEP3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.39■□□□□ 0.53
DNAAF1Q8NEP3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DNAAF1Q8NEP3 AL034346.1-201ENST00000568244 1277 ntBASIC18.39■□□□□ 0.53
DNAAF1Q8NEP3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DNAAF1Q8NEP3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
DNAAF1Q8NEP3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DNAAF1Q8NEP3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
DNAAF1Q8NEP3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.39■□□□□ 0.53
DNAAF1Q8NEP3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DNAAF1Q8NEP3 RNF165-205ENST00000588679 2904 ntBASIC18.39■□□□□ 0.53
DNAAF1Q8NEP3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DNAAF1Q8NEP3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
DNAAF1Q8NEP3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
DNAAF1Q8NEP3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DNAAF1Q8NEP3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
DNAAF1Q8NEP3 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
DNAAF1Q8NEP3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DNAAF1Q8NEP3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DNAAF1Q8NEP3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DNAAF1Q8NEP3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.38■□□□□ 0.53
DNAAF1Q8NEP3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.38■□□□□ 0.53
DNAAF1Q8NEP3 AC131281.2-201ENST00000520478 145 ntBASIC18.38■□□□□ 0.53
DNAAF1Q8NEP3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.38■□□□□ 0.53
DNAAF1Q8NEP3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.38■□□□□ 0.53
DNAAF1Q8NEP3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
DNAAF1Q8NEP3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DNAAF1Q8NEP3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DNAAF1Q8NEP3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DNAAF1Q8NEP3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DNAAF1Q8NEP3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
DNAAF1Q8NEP3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.38■□□□□ 0.53
DNAAF1Q8NEP3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
DNAAF1Q8NEP3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNAAF1Q8NEP3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNAAF1Q8NEP3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
DNAAF1Q8NEP3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.37■□□□□ 0.53
DNAAF1Q8NEP3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms