Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRFBP1Q8NEF9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRFBP1Q8NEF9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRFBP1Q8NEF9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SRFBP1Q8NEF9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRFBP1Q8NEF9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRFBP1Q8NEF9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.05■□□□□ 0.8
SRFBP1Q8NEF9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRFBP1Q8NEF9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SRFBP1Q8NEF9 AC034268.1-201ENST00000441047 882 ntBASIC20.05■□□□□ 0.8
SRFBP1Q8NEF9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.05■□□□□ 0.8
SRFBP1Q8NEF9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SRFBP1Q8NEF9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SRFBP1Q8NEF9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 POU5F1P4-201ENST00000413175 1085 ntBASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 AC138907.5-202ENST00000569484 235 ntBASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SRFBP1Q8NEF9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SRFBP1Q8NEF9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRFBP1Q8NEF9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRFBP1Q8NEF9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
SRFBP1Q8NEF9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.03■□□□□ 0.8
SRFBP1Q8NEF9 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.03■□□□□ 0.8
SRFBP1Q8NEF9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.03■□□□□ 0.8
SRFBP1Q8NEF9 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.03■□□□□ 0.8
SRFBP1Q8NEF9 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRFBP1Q8NEF9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SRFBP1Q8NEF9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
SRFBP1Q8NEF9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRFBP1Q8NEF9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SRFBP1Q8NEF9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.02■□□□□ 0.8
SRFBP1Q8NEF9 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRFBP1Q8NEF9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRFBP1Q8NEF9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRFBP1Q8NEF9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.02■□□□□ 0.8
SRFBP1Q8NEF9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.02■□□□□ 0.8
SRFBP1Q8NEF9 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.02■□□□□ 0.8
SRFBP1Q8NEF9 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.02■□□□□ 0.8
SRFBP1Q8NEF9 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.02■□□□□ 0.8
SRFBP1Q8NEF9 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.02■□□□□ 0.8
SRFBP1Q8NEF9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.02■□□□□ 0.8
SRFBP1Q8NEF9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
SRFBP1Q8NEF9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SRFBP1Q8NEF9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SRFBP1Q8NEF9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SRFBP1Q8NEF9 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SRFBP1Q8NEF9 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRFBP1Q8NEF9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRFBP1Q8NEF9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRFBP1Q8NEF9 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.01■□□□□ 0.79
SRFBP1Q8NEF9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRFBP1Q8NEF9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.01■□□□□ 0.79
SRFBP1Q8NEF9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.01■□□□□ 0.79
SRFBP1Q8NEF9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.01■□□□□ 0.79
SRFBP1Q8NEF9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.01■□□□□ 0.79
SRFBP1Q8NEF9 AC120498.10-201ENST00000621827 505 ntBASIC20.01■□□□□ 0.79
SRFBP1Q8NEF9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SRFBP1Q8NEF9 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SRFBP1Q8NEF9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRFBP1Q8NEF9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SRFBP1Q8NEF9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRFBP1Q8NEF9 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRFBP1Q8NEF9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRFBP1Q8NEF9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SRFBP1Q8NEF9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20■□□□□ 0.79
SRFBP1Q8NEF9 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRFBP1Q8NEF9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SRFBP1Q8NEF9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SRFBP1Q8NEF9 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SRFBP1Q8NEF9 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SRFBP1Q8NEF9 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
SRFBP1Q8NEF9 KRT19P1-201ENST00000405746 1186 ntBASIC20■□□□□ 0.79
SRFBP1Q8NEF9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20■□□□□ 0.79
SRFBP1Q8NEF9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20■□□□□ 0.79
SRFBP1Q8NEF9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20■□□□□ 0.79
SRFBP1Q8NEF9 DUX4L2-201ENST00000561772 1275 ntBASIC20■□□□□ 0.79
SRFBP1Q8NEF9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20■□□□□ 0.79
SRFBP1Q8NEF9 DUX4L6-201ENST00000626483 1275 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms