Protein–RNA interactions for Protein: Q8N9B4

ANKRD42, Ankyrin repeat domain-containing protein 42, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD42Q8N9B4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ANKRD42Q8N9B4 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 AC006128.1-201ENST00000624704 1661 ntBASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ANKRD42Q8N9B4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
ANKRD42Q8N9B4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.98
ANKRD42Q8N9B4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
ANKRD42Q8N9B4 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ANKRD42Q8N9B4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ANKRD42Q8N9B4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ANKRD42Q8N9B4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
ANKRD42Q8N9B4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ANKRD42Q8N9B4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ANKRD42Q8N9B4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.14■□□□□ 0.97
ANKRD42Q8N9B4 MTDHP2-201ENST00000601468 714 ntBASIC21.14■□□□□ 0.97
ANKRD42Q8N9B4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ANKRD42Q8N9B4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
ANKRD42Q8N9B4 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ANKRD42Q8N9B4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.14■□□□□ 0.97
ANKRD42Q8N9B4 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ANKRD42Q8N9B4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ANKRD42Q8N9B4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
ANKRD42Q8N9B4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ANKRD42Q8N9B4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
ANKRD42Q8N9B4 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ANKRD42Q8N9B4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ANKRD42Q8N9B4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
ANKRD42Q8N9B4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ANKRD42Q8N9B4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.13■□□□□ 0.97
ANKRD42Q8N9B4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.13■□□□□ 0.97
ANKRD42Q8N9B4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ANKRD42Q8N9B4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ANKRD42Q8N9B4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ANKRD42Q8N9B4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ANKRD42Q8N9B4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
ANKRD42Q8N9B4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.13■□□□□ 0.97
ANKRD42Q8N9B4 AC092028.1-203ENST00000608262 953 ntBASIC21.13■□□□□ 0.97
ANKRD42Q8N9B4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ANKRD42Q8N9B4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ANKRD42Q8N9B4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ANKRD42Q8N9B4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ANKRD42Q8N9B4 AC133637.1-201ENST00000624115 1537 ntBASIC21.13■□□□□ 0.97
ANKRD42Q8N9B4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ANKRD42Q8N9B4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ANKRD42Q8N9B4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.12■□□□□ 0.97
ANKRD42Q8N9B4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.12■□□□□ 0.97
ANKRD42Q8N9B4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ANKRD42Q8N9B4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ANKRD42Q8N9B4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
ANKRD42Q8N9B4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ANKRD42Q8N9B4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.12■□□□□ 0.97
ANKRD42Q8N9B4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ANKRD42Q8N9B4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.12■□□□□ 0.97
ANKRD42Q8N9B4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.12■□□□□ 0.97
ANKRD42Q8N9B4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ANKRD42Q8N9B4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.12■□□□□ 0.97
ANKRD42Q8N9B4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ANKRD42Q8N9B4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ANKRD42Q8N9B4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.12■□□□□ 0.97
ANKRD42Q8N9B4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ANKRD42Q8N9B4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
ANKRD42Q8N9B4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.12■□□□□ 0.97
ANKRD42Q8N9B4 PLK5-205ENST00000642079 1969 ntBASIC21.12■□□□□ 0.97
ANKRD42Q8N9B4 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ANKRD42Q8N9B4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ANKRD42Q8N9B4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.11■□□□□ 0.97
ANKRD42Q8N9B4 AC003102.1-202ENST00000563394 1796 ntBASIC21.11■□□□□ 0.97
ANKRD42Q8N9B4 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.11■□□□□ 0.97
ANKRD42Q8N9B4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ANKRD42Q8N9B4 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ANKRD42Q8N9B4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ANKRD42Q8N9B4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ANKRD42Q8N9B4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ANKRD42Q8N9B4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.11■□□□□ 0.97
ANKRD42Q8N9B4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.11■□□□□ 0.97
ANKRD42Q8N9B4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms