Protein–RNA interactions for Protein: Q8N8W4

PNPLA1, Patatin-like phospholipase domain-containing protein 1, humanhuman

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNPLA1Q8N8W4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PNPLA1Q8N8W4 AF106564.1-201ENST00000607058 2553 ntBASIC21.32■■□□□ 1
PNPLA1Q8N8W4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PNPLA1Q8N8W4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PNPLA1Q8N8W4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.31■■□□□ 1
PNPLA1Q8N8W4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.31■■□□□ 1
PNPLA1Q8N8W4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PNPLA1Q8N8W4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PNPLA1Q8N8W4 BX005040.4-201ENST00000637145 1518 ntBASIC21.31■■□□□ 1
PNPLA1Q8N8W4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PNPLA1Q8N8W4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PNPLA1Q8N8W4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PNPLA1Q8N8W4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.31■■□□□ 1
PNPLA1Q8N8W4 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.31■■□□□ 1
PNPLA1Q8N8W4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC21.31■■□□□ 1
PNPLA1Q8N8W4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PNPLA1Q8N8W4 AC003102.1-202ENST00000563394 1796 ntBASIC21.31■■□□□ 1
PNPLA1Q8N8W4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
PNPLA1Q8N8W4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PNPLA1Q8N8W4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PNPLA1Q8N8W4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PNPLA1Q8N8W4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PNPLA1Q8N8W4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PNPLA1Q8N8W4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PNPLA1Q8N8W4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.3■■□□□ 1
PNPLA1Q8N8W4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.3■■□□□ 1
PNPLA1Q8N8W4 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.3■■□□□ 1
PNPLA1Q8N8W4 AC005229.4-201ENST00000610085 2198 ntBASIC21.3■■□□□ 1
PNPLA1Q8N8W4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.3■■□□□ 1
PNPLA1Q8N8W4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
PNPLA1Q8N8W4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PNPLA1Q8N8W4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.29■■□□□ 1
PNPLA1Q8N8W4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PNPLA1Q8N8W4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PNPLA1Q8N8W4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.29■■□□□ 1
PNPLA1Q8N8W4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PNPLA1Q8N8W4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.29■■□□□ 1
PNPLA1Q8N8W4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.29■■□□□ 1
PNPLA1Q8N8W4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.29■■□□□ 1
PNPLA1Q8N8W4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PNPLA1Q8N8W4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
PNPLA1Q8N8W4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.29■■□□□ 1
PNPLA1Q8N8W4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PNPLA1Q8N8W4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PNPLA1Q8N8W4 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.28■■□□□ 1
PNPLA1Q8N8W4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.28■■□□□ 1
PNPLA1Q8N8W4 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PNPLA1Q8N8W4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PNPLA1Q8N8W4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.28■■□□□ 1
PNPLA1Q8N8W4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.28■■□□□ 1
PNPLA1Q8N8W4 KRT18P6-201ENST00000555540 1265 ntBASIC21.28■■□□□ 1
PNPLA1Q8N8W4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.28■■□□□ 1
PNPLA1Q8N8W4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.28■■□□□ 1
PNPLA1Q8N8W4 MDK-213ENST00000617138 635 ntTSL 2 BASIC21.28■■□□□ 1
PNPLA1Q8N8W4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.28■■□□□ 1
PNPLA1Q8N8W4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
PNPLA1Q8N8W4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.28■■□□□ 1
PNPLA1Q8N8W4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.28■■□□□ 1
PNPLA1Q8N8W4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.27■■□□□ 1
PNPLA1Q8N8W4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.27■■□□□ 1
PNPLA1Q8N8W4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.27■■□□□ 1
PNPLA1Q8N8W4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.27■■□□□ 1
PNPLA1Q8N8W4 KRT18P11-201ENST00000435214 1283 ntBASIC21.27■■□□□ 1
PNPLA1Q8N8W4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.27■■□□□ 1
PNPLA1Q8N8W4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.27■■□□□ 1
PNPLA1Q8N8W4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.27■■□□□ 1
PNPLA1Q8N8W4 AC142086.2-201ENST00000569753 217 ntBASIC21.27■■□□□ 1
PNPLA1Q8N8W4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PNPLA1Q8N8W4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PNPLA1Q8N8W4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.27■■□□□ 1
PNPLA1Q8N8W4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.27■□□□□ 0.99
PNPLA1Q8N8W4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PNPLA1Q8N8W4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.26■□□□□ 0.99
PNPLA1Q8N8W4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PNPLA1Q8N8W4 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PNPLA1Q8N8W4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.26■□□□□ 0.99
PNPLA1Q8N8W4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
PNPLA1Q8N8W4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.26■□□□□ 0.99
PNPLA1Q8N8W4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PNPLA1Q8N8W4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PNPLA1Q8N8W4 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.26■□□□□ 0.99
PNPLA1Q8N8W4 AC083906.2-201ENST00000511578 360 ntBASIC21.26■□□□□ 0.99
PNPLA1Q8N8W4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.26■□□□□ 0.99
PNPLA1Q8N8W4 MIR4651-201ENST00000582622 73 ntBASIC21.26■□□□□ 0.99
PNPLA1Q8N8W4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.26■□□□□ 0.99
PNPLA1Q8N8W4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
PNPLA1Q8N8W4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PNPLA1Q8N8W4 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.26■□□□□ 0.99
PNPLA1Q8N8W4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
PNPLA1Q8N8W4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PNPLA1Q8N8W4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PNPLA1Q8N8W4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.25■□□□□ 0.99
PNPLA1Q8N8W4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PNPLA1Q8N8W4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PNPLA1Q8N8W4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PNPLA1Q8N8W4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PNPLA1Q8N8W4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.25■□□□□ 0.99
PNPLA1Q8N8W4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.25■□□□□ 0.99
PNPLA1Q8N8W4 AL121832.2-201ENST00000610979 668 ntBASIC21.25■□□□□ 0.99
PNPLA1Q8N8W4 AL050303.2-201ENST00000619798 666 ntBASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms