Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.24■□□□□ 0.67
LSMEM1Q8N8F7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSMEM1Q8N8F7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.24■□□□□ 0.67
LSMEM1Q8N8F7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
LSMEM1Q8N8F7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSMEM1Q8N8F7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSMEM1Q8N8F7 AC142381.2-201ENST00000566120 298 ntBASIC19.24■□□□□ 0.67
LSMEM1Q8N8F7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.24■□□□□ 0.67
LSMEM1Q8N8F7 AL358852.1-201ENST00000623174 1268 ntBASIC19.24■□□□□ 0.67
LSMEM1Q8N8F7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.24■□□□□ 0.67
LSMEM1Q8N8F7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
LSMEM1Q8N8F7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LSMEM1Q8N8F7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LSMEM1Q8N8F7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.24■□□□□ 0.67
LSMEM1Q8N8F7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LSMEM1Q8N8F7 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.23■□□□□ 0.67
LSMEM1Q8N8F7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LSMEM1Q8N8F7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LSMEM1Q8N8F7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.23■□□□□ 0.67
LSMEM1Q8N8F7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.23■□□□□ 0.67
LSMEM1Q8N8F7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LSMEM1Q8N8F7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.23■□□□□ 0.67
LSMEM1Q8N8F7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LSMEM1Q8N8F7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LSMEM1Q8N8F7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LSMEM1Q8N8F7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LSMEM1Q8N8F7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
LSMEM1Q8N8F7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
LSMEM1Q8N8F7 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.22■□□□□ 0.67
LSMEM1Q8N8F7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LSMEM1Q8N8F7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LSMEM1Q8N8F7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LSMEM1Q8N8F7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.22■□□□□ 0.67
LSMEM1Q8N8F7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.22■□□□□ 0.67
LSMEM1Q8N8F7 AC005837.3-201ENST00000612163 286 ntBASIC19.22■□□□□ 0.67
LSMEM1Q8N8F7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.22■□□□□ 0.67
LSMEM1Q8N8F7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LSMEM1Q8N8F7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LSMEM1Q8N8F7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LSMEM1Q8N8F7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LSMEM1Q8N8F7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.21■□□□□ 0.67
LSMEM1Q8N8F7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.21■□□□□ 0.67
LSMEM1Q8N8F7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
LSMEM1Q8N8F7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
LSMEM1Q8N8F7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LSMEM1Q8N8F7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LSMEM1Q8N8F7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
LSMEM1Q8N8F7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LSMEM1Q8N8F7 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LSMEM1Q8N8F7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LSMEM1Q8N8F7 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.21■□□□□ 0.67
LSMEM1Q8N8F7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.21■□□□□ 0.67
LSMEM1Q8N8F7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.21■□□□□ 0.67
LSMEM1Q8N8F7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LSMEM1Q8N8F7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LSMEM1Q8N8F7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.21■□□□□ 0.67
LSMEM1Q8N8F7 TPRG1LP1-201ENST00000598702 760 ntBASIC19.21■□□□□ 0.67
LSMEM1Q8N8F7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LSMEM1Q8N8F7 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.21■□□□□ 0.67
LSMEM1Q8N8F7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LSMEM1Q8N8F7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.2■□□□□ 0.66
LSMEM1Q8N8F7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LSMEM1Q8N8F7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.2■□□□□ 0.66
LSMEM1Q8N8F7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.2■□□□□ 0.66
LSMEM1Q8N8F7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.2■□□□□ 0.66
LSMEM1Q8N8F7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LSMEM1Q8N8F7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LSMEM1Q8N8F7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LSMEM1Q8N8F7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LSMEM1Q8N8F7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LSMEM1Q8N8F7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.19■□□□□ 0.66
LSMEM1Q8N8F7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LSMEM1Q8N8F7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.19■□□□□ 0.66
LSMEM1Q8N8F7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LSMEM1Q8N8F7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.19■□□□□ 0.66
LSMEM1Q8N8F7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.19■□□□□ 0.66
LSMEM1Q8N8F7 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.19■□□□□ 0.66
LSMEM1Q8N8F7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.19■□□□□ 0.66
LSMEM1Q8N8F7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.19■□□□□ 0.66
LSMEM1Q8N8F7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSMEM1Q8N8F7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.18■□□□□ 0.66
LSMEM1Q8N8F7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.18■□□□□ 0.66
LSMEM1Q8N8F7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
LSMEM1Q8N8F7 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.18■□□□□ 0.66
LSMEM1Q8N8F7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSMEM1Q8N8F7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSMEM1Q8N8F7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.18■□□□□ 0.66
LSMEM1Q8N8F7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.18■□□□□ 0.66
LSMEM1Q8N8F7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LSMEM1Q8N8F7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.18■□□□□ 0.66
LSMEM1Q8N8F7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LSMEM1Q8N8F7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LSMEM1Q8N8F7 AC053503.5-201ENST00000601508 636 ntBASIC19.18■□□□□ 0.66
LSMEM1Q8N8F7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.18■□□□□ 0.66
LSMEM1Q8N8F7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSMEM1Q8N8F7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSMEM1Q8N8F7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
LSMEM1Q8N8F7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LSMEM1Q8N8F7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LSMEM1Q8N8F7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms