Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 FAM99A-202ENST00000538190 1989 ntBASIC21.53■■□□□ 1.04
PAF1Q8N7H5 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PAF1Q8N7H5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PAF1Q8N7H5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PAF1Q8N7H5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PAF1Q8N7H5 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PAF1Q8N7H5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.52■■□□□ 1.04
PAF1Q8N7H5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PAF1Q8N7H5 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PAF1Q8N7H5 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.52■■□□□ 1.04
PAF1Q8N7H5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
PAF1Q8N7H5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PAF1Q8N7H5 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PAF1Q8N7H5 ECEL1P1-201ENST00000373592 1742 ntBASIC21.52■■□□□ 1.03
PAF1Q8N7H5 KRT87P-202ENST00000534226 1464 ntBASIC21.52■■□□□ 1.03
PAF1Q8N7H5 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PAF1Q8N7H5 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PAF1Q8N7H5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.51■■□□□ 1.03
PAF1Q8N7H5 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PAF1Q8N7H5 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PAF1Q8N7H5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PAF1Q8N7H5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PAF1Q8N7H5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.51■■□□□ 1.03
PAF1Q8N7H5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PAF1Q8N7H5 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PAF1Q8N7H5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PAF1Q8N7H5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.51■■□□□ 1.03
PAF1Q8N7H5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
PAF1Q8N7H5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.51■■□□□ 1.03
PAF1Q8N7H5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
PAF1Q8N7H5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PAF1Q8N7H5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.51■■□□□ 1.03
PAF1Q8N7H5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PAF1Q8N7H5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PAF1Q8N7H5 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PAF1Q8N7H5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PAF1Q8N7H5 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.51■■□□□ 1.03
PAF1Q8N7H5 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PAF1Q8N7H5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.5■■□□□ 1.03
PAF1Q8N7H5 AC055733.4-201ENST00000638462 1354 ntBASIC21.5■■□□□ 1.03
PAF1Q8N7H5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PAF1Q8N7H5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PAF1Q8N7H5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PAF1Q8N7H5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PAF1Q8N7H5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.5■■□□□ 1.03
PAF1Q8N7H5 KRT18P5-201ENST00000436075 1291 ntBASIC21.5■■□□□ 1.03
PAF1Q8N7H5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PAF1Q8N7H5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.5■■□□□ 1.03
PAF1Q8N7H5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PAF1Q8N7H5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.5■■□□□ 1.03
PAF1Q8N7H5 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PAF1Q8N7H5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PAF1Q8N7H5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PAF1Q8N7H5 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PAF1Q8N7H5 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.5■■□□□ 1.03
PAF1Q8N7H5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PAF1Q8N7H5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.5■■□□□ 1.03
PAF1Q8N7H5 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PAF1Q8N7H5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PAF1Q8N7H5 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.49■■□□□ 1.03
PAF1Q8N7H5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.49■■□□□ 1.03
PAF1Q8N7H5 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PAF1Q8N7H5 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PAF1Q8N7H5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PAF1Q8N7H5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.49■■□□□ 1.03
PAF1Q8N7H5 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.49■■□□□ 1.03
PAF1Q8N7H5 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.49■■□□□ 1.03
PAF1Q8N7H5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.49■■□□□ 1.03
PAF1Q8N7H5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PAF1Q8N7H5 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.49■■□□□ 1.03
PAF1Q8N7H5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PAF1Q8N7H5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PAF1Q8N7H5 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PAF1Q8N7H5 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PAF1Q8N7H5 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PAF1Q8N7H5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms