Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
SMC5Q8IY18 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
SMC5Q8IY18 AL157384.1-201ENST00000445995 2473 ntBASIC26.1■■□□□ 1.77
SMC5Q8IY18 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SMC5Q8IY18 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
SMC5Q8IY18 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SMC5Q8IY18 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SMC5Q8IY18 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC26.1■■□□□ 1.77
SMC5Q8IY18 AC053503.5-201ENST00000601508 636 ntBASIC26.1■■□□□ 1.77
SMC5Q8IY18 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC26.1■■□□□ 1.77
SMC5Q8IY18 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SMC5Q8IY18 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SMC5Q8IY18 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMC5Q8IY18 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMC5Q8IY18 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
SMC5Q8IY18 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC26.09■■□□□ 1.77
SMC5Q8IY18 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SMC5Q8IY18 AC142381.2-201ENST00000566120 298 ntBASIC26.09■■□□□ 1.77
SMC5Q8IY18 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC26.09■■□□□ 1.77
SMC5Q8IY18 AL358852.1-201ENST00000623174 1268 ntBASIC26.09■■□□□ 1.77
SMC5Q8IY18 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SMC5Q8IY18 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMC5Q8IY18 PLK5-205ENST00000642079 1969 ntBASIC26.09■■□□□ 1.77
SMC5Q8IY18 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMC5Q8IY18 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMC5Q8IY18 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMC5Q8IY18 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SMC5Q8IY18 MFF-207ENST00000409565 1548 ntTSL 2 BASIC26.09■■□□□ 1.77
SMC5Q8IY18 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SMC5Q8IY18 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SMC5Q8IY18 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC26.08■■□□□ 1.77
SMC5Q8IY18 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
SMC5Q8IY18 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC26.08■■□□□ 1.77
SMC5Q8IY18 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC26.08■■□□□ 1.77
SMC5Q8IY18 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SMC5Q8IY18 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC26.08■■□□□ 1.77
SMC5Q8IY18 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC26.08■■□□□ 1.77
SMC5Q8IY18 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.08■■□□□ 1.77
SMC5Q8IY18 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SMC5Q8IY18 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SMC5Q8IY18 AC005837.3-201ENST00000612163 286 ntBASIC26.08■■□□□ 1.77
SMC5Q8IY18 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SMC5Q8IY18 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SMC5Q8IY18 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC26.07■■□□□ 1.76
SMC5Q8IY18 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
SMC5Q8IY18 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
SMC5Q8IY18 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.07■■□□□ 1.76
SMC5Q8IY18 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SMC5Q8IY18 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC26.07■■□□□ 1.76
SMC5Q8IY18 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
SMC5Q8IY18 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
SMC5Q8IY18 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SMC5Q8IY18 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
SMC5Q8IY18 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SMC5Q8IY18 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SMC5Q8IY18 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SMC5Q8IY18 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SMC5Q8IY18 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC26.06■■□□□ 1.76
SMC5Q8IY18 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC26.06■■□□□ 1.76
SMC5Q8IY18 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC26.06■■□□□ 1.76
SMC5Q8IY18 MED17-221ENST00000639724 2317 ntTSL 5 BASIC26.06■■□□□ 1.76
SMC5Q8IY18 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC26.06■■□□□ 1.76
SMC5Q8IY18 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SMC5Q8IY18 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SMC5Q8IY18 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
SMC5Q8IY18 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
SMC5Q8IY18 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SMC5Q8IY18 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.05■■□□□ 1.76
SMC5Q8IY18 MIR6084-201ENST00000622012 110 ntBASIC26.05■■□□□ 1.76
SMC5Q8IY18 RALB-208ENST00000631312 311 ntTSL 5 BASIC26.05■■□□□ 1.76
SMC5Q8IY18 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SMC5Q8IY18 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SMC5Q8IY18 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC26.04■■□□□ 1.76
SMC5Q8IY18 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.04■■□□□ 1.76
SMC5Q8IY18 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
SMC5Q8IY18 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SMC5Q8IY18 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC26.04■■□□□ 1.76
SMC5Q8IY18 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SMC5Q8IY18 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SMC5Q8IY18 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC26.03■■□□□ 1.76
SMC5Q8IY18 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC26.03■■□□□ 1.76
SMC5Q8IY18 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
SMC5Q8IY18 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SMC5Q8IY18 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SMC5Q8IY18 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SMC5Q8IY18 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC26.03■■□□□ 1.76
SMC5Q8IY18 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
SMC5Q8IY18 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SMC5Q8IY18 ERF-202ENST00000440177 2032 ntTSL 2 BASIC26.03■■□□□ 1.76
SMC5Q8IY18 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC26.03■■□□□ 1.76
SMC5Q8IY18 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SMC5Q8IY18 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC26.03■■□□□ 1.76
SMC5Q8IY18 AC006128.1-201ENST00000624704 1661 ntBASIC26.03■■□□□ 1.76
SMC5Q8IY18 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SMC5Q8IY18 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC26.02■■□□□ 1.76
SMC5Q8IY18 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SMC5Q8IY18 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SMC5Q8IY18 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
SMC5Q8IY18 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SMC5Q8IY18 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms