Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
RP1L1Q8IWN7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RP1L1Q8IWN7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RP1L1Q8IWN7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RP1L1Q8IWN7 FAM210CP-201ENST00000445714 574 ntBASIC19.02■□□□□ 0.64
RP1L1Q8IWN7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RP1L1Q8IWN7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.02■□□□□ 0.64
RP1L1Q8IWN7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.02■□□□□ 0.64
RP1L1Q8IWN7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.02■□□□□ 0.64
RP1L1Q8IWN7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.02■□□□□ 0.64
RP1L1Q8IWN7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RP1L1Q8IWN7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RP1L1Q8IWN7 RBM17P2-201ENST00000616397 1405 ntBASIC19.02■□□□□ 0.63
RP1L1Q8IWN7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
RP1L1Q8IWN7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RP1L1Q8IWN7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RP1L1Q8IWN7 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 AC093787.1-201ENST00000450396 207 ntBASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RP1L1Q8IWN7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19■□□□□ 0.63
RP1L1Q8IWN7 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RP1L1Q8IWN7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19■□□□□ 0.63
RP1L1Q8IWN7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RP1L1Q8IWN7 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19■□□□□ 0.63
RP1L1Q8IWN7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RP1L1Q8IWN7 AC010980.2-201ENST00000587099 1412 ntBASIC19■□□□□ 0.63
RP1L1Q8IWN7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RP1L1Q8IWN7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19■□□□□ 0.63
RP1L1Q8IWN7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19■□□□□ 0.63
RP1L1Q8IWN7 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RP1L1Q8IWN7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19■□□□□ 0.63
RP1L1Q8IWN7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
RP1L1Q8IWN7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19■□□□□ 0.63
RP1L1Q8IWN7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19■□□□□ 0.63
RP1L1Q8IWN7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19■□□□□ 0.63
RP1L1Q8IWN7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RP1L1Q8IWN7 AP006587.3-201ENST00000525742 1516 ntBASIC19■□□□□ 0.63
RP1L1Q8IWN7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19■□□□□ 0.63
RP1L1Q8IWN7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RP1L1Q8IWN7 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RP1L1Q8IWN7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.99■□□□□ 0.63
RP1L1Q8IWN7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.99■□□□□ 0.63
RP1L1Q8IWN7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RP1L1Q8IWN7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.99■□□□□ 0.63
RP1L1Q8IWN7 LINC01023-201ENST00000606054 436 ntBASIC18.99■□□□□ 0.63
RP1L1Q8IWN7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RP1L1Q8IWN7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RP1L1Q8IWN7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RP1L1Q8IWN7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
RP1L1Q8IWN7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.99■□□□□ 0.63
RP1L1Q8IWN7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RP1L1Q8IWN7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RP1L1Q8IWN7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RP1L1Q8IWN7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RP1L1Q8IWN7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.99■□□□□ 0.63
RP1L1Q8IWN7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.99■□□□□ 0.63
RP1L1Q8IWN7 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.99■□□□□ 0.63
RP1L1Q8IWN7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RP1L1Q8IWN7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RP1L1Q8IWN7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.99■□□□□ 0.63
RP1L1Q8IWN7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RP1L1Q8IWN7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RP1L1Q8IWN7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RP1L1Q8IWN7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.98■□□□□ 0.63
RP1L1Q8IWN7 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RP1L1Q8IWN7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.98■□□□□ 0.63
RP1L1Q8IWN7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RP1L1Q8IWN7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.98■□□□□ 0.63
RP1L1Q8IWN7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.98■□□□□ 0.63
RP1L1Q8IWN7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.98■□□□□ 0.63
RP1L1Q8IWN7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RP1L1Q8IWN7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RP1L1Q8IWN7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RP1L1Q8IWN7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.98■□□□□ 0.63
RP1L1Q8IWN7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.98■□□□□ 0.63
RP1L1Q8IWN7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.98■□□□□ 0.63
RP1L1Q8IWN7 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RP1L1Q8IWN7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
RP1L1Q8IWN7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RP1L1Q8IWN7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms