Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CROCCP3Q8IVE0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CROCCP3Q8IVE0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CROCCP3Q8IVE0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CROCCP3Q8IVE0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CROCCP3Q8IVE0 AP000974.1-201ENST00000623909 2387 ntBASIC19.03■□□□□ 0.64
CROCCP3Q8IVE0 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CROCCP3Q8IVE0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CROCCP3Q8IVE0 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CROCCP3Q8IVE0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.03■□□□□ 0.64
CROCCP3Q8IVE0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CROCCP3Q8IVE0 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CROCCP3Q8IVE0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CROCCP3Q8IVE0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CROCCP3Q8IVE0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.03■□□□□ 0.64
CROCCP3Q8IVE0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CROCCP3Q8IVE0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.02■□□□□ 0.64
CROCCP3Q8IVE0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
CROCCP3Q8IVE0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CROCCP3Q8IVE0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CROCCP3Q8IVE0 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CROCCP3Q8IVE0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.02■□□□□ 0.64
CROCCP3Q8IVE0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CROCCP3Q8IVE0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CROCCP3Q8IVE0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CROCCP3Q8IVE0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.02■□□□□ 0.64
CROCCP3Q8IVE0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.02■□□□□ 0.64
CROCCP3Q8IVE0 SPCS2P3-201ENST00000500401 656 ntBASIC19.02■□□□□ 0.64
CROCCP3Q8IVE0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CROCCP3Q8IVE0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CROCCP3Q8IVE0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CROCCP3Q8IVE0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.02■□□□□ 0.63
CROCCP3Q8IVE0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CROCCP3Q8IVE0 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.02■□□□□ 0.63
CROCCP3Q8IVE0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.02■□□□□ 0.63
CROCCP3Q8IVE0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CROCCP3Q8IVE0 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.01■□□□□ 0.63
CROCCP3Q8IVE0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
CROCCP3Q8IVE0 AC073314.1-201ENST00000568729 2216 ntBASIC19.01■□□□□ 0.63
CROCCP3Q8IVE0 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CROCCP3Q8IVE0 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CROCCP3Q8IVE0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CROCCP3Q8IVE0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CROCCP3Q8IVE0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.01■□□□□ 0.63
CROCCP3Q8IVE0 LINC01529-204ENST00000636474 1715 ntBASIC19.01■□□□□ 0.63
CROCCP3Q8IVE0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CROCCP3Q8IVE0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.01■□□□□ 0.63
CROCCP3Q8IVE0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CROCCP3Q8IVE0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CROCCP3Q8IVE0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CROCCP3Q8IVE0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.01■□□□□ 0.63
CROCCP3Q8IVE0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CROCCP3Q8IVE0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CROCCP3Q8IVE0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CROCCP3Q8IVE0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CROCCP3Q8IVE0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CROCCP3Q8IVE0 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19■□□□□ 0.63
CROCCP3Q8IVE0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CROCCP3Q8IVE0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CROCCP3Q8IVE0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CROCCP3Q8IVE0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CROCCP3Q8IVE0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CROCCP3Q8IVE0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CROCCP3Q8IVE0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CROCCP3Q8IVE0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19■□□□□ 0.63
CROCCP3Q8IVE0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 FP325331.1-202ENST00000623531 1380 ntBASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 AL592293.1-201ENST00000502889 1188 ntBASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.99■□□□□ 0.63
CROCCP3Q8IVE0 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CROCCP3Q8IVE0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.98■□□□□ 0.63
CROCCP3Q8IVE0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CROCCP3Q8IVE0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CROCCP3Q8IVE0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.98■□□□□ 0.63
CROCCP3Q8IVE0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CROCCP3Q8IVE0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CROCCP3Q8IVE0 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CROCCP3Q8IVE0 GPX1-201ENST00000419349 1106 ntBASIC18.98■□□□□ 0.63
CROCCP3Q8IVE0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CROCCP3Q8IVE0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms