Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.26■■□□□ 1.15
RNF135Q8IUD6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
RNF135Q8IUD6 AC007322.4-201ENST00000509611 723 ntBASIC22.26■■□□□ 1.15
RNF135Q8IUD6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.26■■□□□ 1.15
RNF135Q8IUD6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
RNF135Q8IUD6 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.26■■□□□ 1.15
RNF135Q8IUD6 AC069236.1-201ENST00000604339 616 ntBASIC22.26■■□□□ 1.15
RNF135Q8IUD6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.26■■□□□ 1.15
RNF135Q8IUD6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
RNF135Q8IUD6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
RNF135Q8IUD6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF135Q8IUD6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF135Q8IUD6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF135Q8IUD6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF135Q8IUD6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF135Q8IUD6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.25■■□□□ 1.15
RNF135Q8IUD6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC22.25■■□□□ 1.15
RNF135Q8IUD6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF135Q8IUD6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF135Q8IUD6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.25■■□□□ 1.15
RNF135Q8IUD6 FAM210CP-201ENST00000445714 574 ntBASIC22.25■■□□□ 1.15
RNF135Q8IUD6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
RNF135Q8IUD6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
RNF135Q8IUD6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.25■■□□□ 1.15
RNF135Q8IUD6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.25■■□□□ 1.15
RNF135Q8IUD6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.25■■□□□ 1.15
RNF135Q8IUD6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF135Q8IUD6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.25■■□□□ 1.15
RNF135Q8IUD6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF135Q8IUD6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
RNF135Q8IUD6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF135Q8IUD6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF135Q8IUD6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF135Q8IUD6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RNF135Q8IUD6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.24■■□□□ 1.15
RNF135Q8IUD6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF135Q8IUD6 LINC01960-201ENST00000563759 1884 ntBASIC22.24■■□□□ 1.15
RNF135Q8IUD6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF135Q8IUD6 AC233723.2-201ENST00000623798 2106 ntBASIC22.24■■□□□ 1.15
RNF135Q8IUD6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF135Q8IUD6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF135Q8IUD6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF135Q8IUD6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF135Q8IUD6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF135Q8IUD6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RNF135Q8IUD6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC22.24■■□□□ 1.15
RNF135Q8IUD6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC22.24■■□□□ 1.15
RNF135Q8IUD6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.24■■□□□ 1.15
RNF135Q8IUD6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.24■■□□□ 1.15
RNF135Q8IUD6 AC073648.6-201ENST00000641589 218 ntBASIC22.24■■□□□ 1.15
RNF135Q8IUD6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF135Q8IUD6 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.24■■□□□ 1.15
RNF135Q8IUD6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF135Q8IUD6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF135Q8IUD6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF135Q8IUD6 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF135Q8IUD6 AC055733.4-201ENST00000638462 1354 ntBASIC22.24■■□□□ 1.15
RNF135Q8IUD6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
RNF135Q8IUD6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF135Q8IUD6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF135Q8IUD6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF135Q8IUD6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF135Q8IUD6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC22.23■■□□□ 1.15
RNF135Q8IUD6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.23■■□□□ 1.15
RNF135Q8IUD6 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF135Q8IUD6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC22.23■■□□□ 1.15
RNF135Q8IUD6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.23■■□□□ 1.15
RNF135Q8IUD6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.23■■□□□ 1.15
RNF135Q8IUD6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC22.23■■□□□ 1.15
RNF135Q8IUD6 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF135Q8IUD6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF135Q8IUD6 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
RNF135Q8IUD6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF135Q8IUD6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF135Q8IUD6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF135Q8IUD6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.22■■□□□ 1.15
RNF135Q8IUD6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF135Q8IUD6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RNF135Q8IUD6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF135Q8IUD6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RNF135Q8IUD6 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF135Q8IUD6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC22.22■■□□□ 1.15
RNF135Q8IUD6 UBE2SP1-201ENST00000450587 669 ntBASIC22.22■■□□□ 1.15
RNF135Q8IUD6 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RNF135Q8IUD6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
RNF135Q8IUD6 AC026366.1-201ENST00000488803 879 ntBASIC22.22■■□□□ 1.15
RNF135Q8IUD6 AC091874.3-201ENST00000512672 1195 ntBASIC22.22■■□□□ 1.15
RNF135Q8IUD6 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC22.22■■□□□ 1.15
RNF135Q8IUD6 AC010331.1-201ENST00000611423 582 ntBASIC22.22■■□□□ 1.15
RNF135Q8IUD6 AC073912.3-201ENST00000624414 853 ntBASIC22.22■■□□□ 1.15
RNF135Q8IUD6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.22■■□□□ 1.15
RNF135Q8IUD6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
RNF135Q8IUD6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.22■■□□□ 1.15
RNF135Q8IUD6 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF135Q8IUD6 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF135Q8IUD6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF135Q8IUD6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RNF135Q8IUD6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF135Q8IUD6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.21■■□□□ 1.15
RNF135Q8IUD6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms