Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC190Q86UF4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC190Q86UF4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC190Q86UF4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC190Q86UF4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC190Q86UF4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC190Q86UF4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC190Q86UF4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC190Q86UF4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC190Q86UF4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC190Q86UF4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC190Q86UF4 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC190Q86UF4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC190Q86UF4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
CCDC190Q86UF4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC190Q86UF4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC190Q86UF4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CCDC190Q86UF4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.53
CCDC190Q86UF4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC190Q86UF4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC190Q86UF4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC190Q86UF4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC190Q86UF4 AL592293.1-201ENST00000502889 1188 ntBASIC18.33■□□□□ 0.52
CCDC190Q86UF4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC190Q86UF4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC190Q86UF4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC190Q86UF4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC190Q86UF4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC190Q86UF4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC190Q86UF4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC190Q86UF4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC190Q86UF4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC190Q86UF4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC190Q86UF4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC190Q86UF4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC190Q86UF4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC190Q86UF4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC190Q86UF4 AC120024.1-201ENST00000562672 995 ntBASIC18.32■□□□□ 0.52
CCDC190Q86UF4 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC190Q86UF4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC190Q86UF4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC190Q86UF4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC190Q86UF4 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC190Q86UF4 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC190Q86UF4 AC004408.2-201ENST00000623613 2777 ntBASIC18.32■□□□□ 0.52
CCDC190Q86UF4 AC007225.1-201ENST00000566331 1836 ntBASIC18.32■□□□□ 0.52
CCDC190Q86UF4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC190Q86UF4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC190Q86UF4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC190Q86UF4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC190Q86UF4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC190Q86UF4 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC190Q86UF4 AC026471.1-201ENST00000564629 3026 ntBASIC18.31■□□□□ 0.52
CCDC190Q86UF4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC190Q86UF4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC190Q86UF4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC190Q86UF4 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC190Q86UF4 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC190Q86UF4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC190Q86UF4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC190Q86UF4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC190Q86UF4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC190Q86UF4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC190Q86UF4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC190Q86UF4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.31■□□□□ 0.52
CCDC190Q86UF4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC190Q86UF4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC190Q86UF4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC190Q86UF4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC190Q86UF4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC190Q86UF4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC190Q86UF4 MIR4281-201ENST00000580852 62 ntBASIC18.3■□□□□ 0.52
CCDC190Q86UF4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CCDC190Q86UF4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CCDC190Q86UF4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC190Q86UF4 OR7E47P-201ENST00000546390 1422 ntBASIC18.3■□□□□ 0.52
CCDC190Q86UF4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC190Q86UF4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CCDC190Q86UF4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC190Q86UF4 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.3■□□□□ 0.52
CCDC190Q86UF4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC190Q86UF4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC190Q86UF4 LETM1P2-201ENST00000597330 2178 ntBASIC18.3■□□□□ 0.52
CCDC190Q86UF4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCDC190Q86UF4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.3■□□□□ 0.52
CCDC190Q86UF4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC190Q86UF4 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC190Q86UF4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC190Q86UF4 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC190Q86UF4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC190Q86UF4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC190Q86UF4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC190Q86UF4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC190Q86UF4 DUX4L9-201ENST00000449051 1259 ntBASIC18.29■□□□□ 0.52
CCDC190Q86UF4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC190Q86UF4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC190Q86UF4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CCDC190Q86UF4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC190Q86UF4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC190Q86UF4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms