Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRTM1Q86UE6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRTM1Q86UE6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRTM1Q86UE6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.23■□□□□ 0.51
LRRTM1Q86UE6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRTM1Q86UE6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRTM1Q86UE6 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRTM1Q86UE6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRTM1Q86UE6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRTM1Q86UE6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LRRTM1Q86UE6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRTM1Q86UE6 AP006587.3-201ENST00000525742 1516 ntBASIC18.23■□□□□ 0.51
LRRTM1Q86UE6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LRRTM1Q86UE6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRTM1Q86UE6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRTM1Q86UE6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRTM1Q86UE6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRTM1Q86UE6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRTM1Q86UE6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRTM1Q86UE6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRTM1Q86UE6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRTM1Q86UE6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRTM1Q86UE6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRTM1Q86UE6 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.22■□□□□ 0.51
LRRTM1Q86UE6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRTM1Q86UE6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRTM1Q86UE6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRTM1Q86UE6 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRTM1Q86UE6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRTM1Q86UE6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRTM1Q86UE6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LRRTM1Q86UE6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRTM1Q86UE6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LRRTM1Q86UE6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRTM1Q86UE6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LRRTM1Q86UE6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRTM1Q86UE6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LRRTM1Q86UE6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRRTM1Q86UE6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LRRTM1Q86UE6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.21■□□□□ 0.51
LRRTM1Q86UE6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRTM1Q86UE6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRTM1Q86UE6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRTM1Q86UE6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRTM1Q86UE6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.21■□□□□ 0.51
LRRTM1Q86UE6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRTM1Q86UE6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRTM1Q86UE6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRTM1Q86UE6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRTM1Q86UE6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
LRRTM1Q86UE6 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRTM1Q86UE6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRTM1Q86UE6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
LRRTM1Q86UE6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
LRRTM1Q86UE6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.21■□□□□ 0.5
LRRTM1Q86UE6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRTM1Q86UE6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRTM1Q86UE6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
LRRTM1Q86UE6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRTM1Q86UE6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRTM1Q86UE6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LRRTM1Q86UE6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRTM1Q86UE6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LRRTM1Q86UE6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LRRTM1Q86UE6 KRT16P3-201ENST00000439127 1283 ntBASIC18.2■□□□□ 0.5
LRRTM1Q86UE6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRTM1Q86UE6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRTM1Q86UE6 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRTM1Q86UE6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
LRRTM1Q86UE6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRTM1Q86UE6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRTM1Q86UE6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRTM1Q86UE6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LRRTM1Q86UE6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRTM1Q86UE6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRTM1Q86UE6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRTM1Q86UE6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRTM1Q86UE6 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRTM1Q86UE6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LRRTM1Q86UE6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.19■□□□□ 0.5
LRRTM1Q86UE6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
LRRTM1Q86UE6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRTM1Q86UE6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRTM1Q86UE6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
LRRTM1Q86UE6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRTM1Q86UE6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRTM1Q86UE6 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRTM1Q86UE6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRTM1Q86UE6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRTM1Q86UE6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LRRTM1Q86UE6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRTM1Q86UE6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRTM1Q86UE6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRTM1Q86UE6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRTM1Q86UE6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRTM1Q86UE6 AL356740.2-201ENST00000601559 647 ntBASIC18.18■□□□□ 0.5
LRRTM1Q86UE6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRTM1Q86UE6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRTM1Q86UE6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRTM1Q86UE6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms