Protein–RNA interactions for Protein: Q86UC2

RSPH3, Radial spoke head protein 3 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3Q86UC2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC23.19■■□□□ 1.3
RSPH3Q86UC2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RSPH3Q86UC2 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.19■■□□□ 1.3
RSPH3Q86UC2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RSPH3Q86UC2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
RSPH3Q86UC2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.19■■□□□ 1.3
RSPH3Q86UC2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
RSPH3Q86UC2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RSPH3Q86UC2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RSPH3Q86UC2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RSPH3Q86UC2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.18■■□□□ 1.3
RSPH3Q86UC2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
RSPH3Q86UC2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.18■■□□□ 1.3
RSPH3Q86UC2 MIR4651-201ENST00000582622 73 ntBASIC23.18■■□□□ 1.3
RSPH3Q86UC2 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.18■■□□□ 1.3
RSPH3Q86UC2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
RSPH3Q86UC2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RSPH3Q86UC2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RSPH3Q86UC2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.17■■□□□ 1.3
RSPH3Q86UC2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RSPH3Q86UC2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
RSPH3Q86UC2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RSPH3Q86UC2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
RSPH3Q86UC2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.17■■□□□ 1.3
RSPH3Q86UC2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.17■■□□□ 1.3
RSPH3Q86UC2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.17■■□□□ 1.3
RSPH3Q86UC2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.17■■□□□ 1.3
RSPH3Q86UC2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RSPH3Q86UC2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
RSPH3Q86UC2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.17■■□□□ 1.3
RSPH3Q86UC2 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.17■■□□□ 1.3
RSPH3Q86UC2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.17■■□□□ 1.3
RSPH3Q86UC2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RSPH3Q86UC2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RSPH3Q86UC2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RSPH3Q86UC2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RSPH3Q86UC2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.17■■□□□ 1.3
RSPH3Q86UC2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
RSPH3Q86UC2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RSPH3Q86UC2 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RSPH3Q86UC2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
RSPH3Q86UC2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.16■■□□□ 1.3
RSPH3Q86UC2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.16■■□□□ 1.3
RSPH3Q86UC2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RSPH3Q86UC2 RARRES2P4-201ENST00000514074 484 ntBASIC23.16■■□□□ 1.3
RSPH3Q86UC2 RNA5SP413-201ENST00000516373 109 ntBASIC23.16■■□□□ 1.3
RSPH3Q86UC2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.16■■□□□ 1.3
RSPH3Q86UC2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RSPH3Q86UC2 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.16■■□□□ 1.3
RSPH3Q86UC2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RSPH3Q86UC2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RSPH3Q86UC2 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.16■■□□□ 1.3
RSPH3Q86UC2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC23.15■■□□□ 1.3
RSPH3Q86UC2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.15■■□□□ 1.3
RSPH3Q86UC2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RSPH3Q86UC2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RSPH3Q86UC2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.15■■□□□ 1.3
RSPH3Q86UC2 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RSPH3Q86UC2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RSPH3Q86UC2 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RSPH3Q86UC2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RSPH3Q86UC2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC23.15■■□□□ 1.3
RSPH3Q86UC2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.3
RSPH3Q86UC2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.14■■□□□ 1.3
RSPH3Q86UC2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RSPH3Q86UC2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RSPH3Q86UC2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RSPH3Q86UC2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RSPH3Q86UC2 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RSPH3Q86UC2 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
RSPH3Q86UC2 AC097658.1-201ENST00000475555 843 ntBASIC23.14■■□□□ 1.29
RSPH3Q86UC2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RSPH3Q86UC2 AC010980.2-201ENST00000587099 1412 ntBASIC23.14■■□□□ 1.29
RSPH3Q86UC2 AC127496.7-201ENST00000625110 1798 ntBASIC23.14■■□□□ 1.29
RSPH3Q86UC2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RSPH3Q86UC2 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
RSPH3Q86UC2 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.14■■□□□ 1.29
RSPH3Q86UC2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
RSPH3Q86UC2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
RSPH3Q86UC2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RSPH3Q86UC2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RSPH3Q86UC2 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RSPH3Q86UC2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
RSPH3Q86UC2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC23.13■■□□□ 1.29
RSPH3Q86UC2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RSPH3Q86UC2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.13■■□□□ 1.29
RSPH3Q86UC2 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.13■■□□□ 1.29
RSPH3Q86UC2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RSPH3Q86UC2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RSPH3Q86UC2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
RSPH3Q86UC2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RSPH3Q86UC2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
RSPH3Q86UC2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC23.12■■□□□ 1.29
RSPH3Q86UC2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
RSPH3Q86UC2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RSPH3Q86UC2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RSPH3Q86UC2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
RSPH3Q86UC2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
RSPH3Q86UC2 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RSPH3Q86UC2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms