Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF550Q7Z398 YBX1P1-201ENST00000445822 960 ntBASIC19.34■□□□□ 0.69
ZNF550Q7Z398 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF550Q7Z398 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF550Q7Z398 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF550Q7Z398 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF550Q7Z398 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF550Q7Z398 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF550Q7Z398 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF550Q7Z398 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF550Q7Z398 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF550Q7Z398 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF550Q7Z398 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF550Q7Z398 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF550Q7Z398 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF550Q7Z398 AC005229.4-201ENST00000610085 2198 ntBASIC19.33■□□□□ 0.69
ZNF550Q7Z398 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF550Q7Z398 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF550Q7Z398 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF550Q7Z398 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF550Q7Z398 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.33■□□□□ 0.68
ZNF550Q7Z398 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.33■□□□□ 0.68
ZNF550Q7Z398 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ZNF550Q7Z398 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF550Q7Z398 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
ZNF550Q7Z398 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF550Q7Z398 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF550Q7Z398 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF550Q7Z398 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
ZNF550Q7Z398 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF550Q7Z398 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF550Q7Z398 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF550Q7Z398 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
ZNF550Q7Z398 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF550Q7Z398 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF550Q7Z398 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF550Q7Z398 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF550Q7Z398 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.32■□□□□ 0.68
ZNF550Q7Z398 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.32■□□□□ 0.68
ZNF550Q7Z398 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF550Q7Z398 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF550Q7Z398 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF550Q7Z398 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF550Q7Z398 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF550Q7Z398 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF550Q7Z398 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF550Q7Z398 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF550Q7Z398 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF550Q7Z398 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
ZNF550Q7Z398 AL024507.2-201ENST00000606070 2574 ntBASIC19.31■□□□□ 0.68
ZNF550Q7Z398 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF550Q7Z398 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.31■□□□□ 0.68
ZNF550Q7Z398 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ZNF550Q7Z398 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF550Q7Z398 AC034268.1-201ENST00000441047 882 ntBASIC19.31■□□□□ 0.68
ZNF550Q7Z398 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF550Q7Z398 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.31■□□□□ 0.68
ZNF550Q7Z398 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF550Q7Z398 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.31■□□□□ 0.68
ZNF550Q7Z398 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ZNF550Q7Z398 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF550Q7Z398 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.3■□□□□ 0.68
ZNF550Q7Z398 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ZNF550Q7Z398 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ZNF550Q7Z398 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF550Q7Z398 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF550Q7Z398 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF550Q7Z398 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.3■□□□□ 0.68
ZNF550Q7Z398 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.3■□□□□ 0.68
ZNF550Q7Z398 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF550Q7Z398 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.3■□□□□ 0.68
ZNF550Q7Z398 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.3■□□□□ 0.68
ZNF550Q7Z398 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.3■□□□□ 0.68
ZNF550Q7Z398 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF550Q7Z398 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF550Q7Z398 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF550Q7Z398 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ZNF550Q7Z398 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ZNF550Q7Z398 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF550Q7Z398 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.29■□□□□ 0.68
ZNF550Q7Z398 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF550Q7Z398 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.29■□□□□ 0.68
ZNF550Q7Z398 AC027612.3-201ENST00000413684 1047 ntBASIC19.29■□□□□ 0.68
ZNF550Q7Z398 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.29■□□□□ 0.68
ZNF550Q7Z398 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.29■□□□□ 0.68
ZNF550Q7Z398 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF550Q7Z398 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF550Q7Z398 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF550Q7Z398 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF550Q7Z398 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF550Q7Z398 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF550Q7Z398 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ZNF550Q7Z398 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF550Q7Z398 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
ZNF550Q7Z398 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ZNF550Q7Z398 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF550Q7Z398 AF106564.1-201ENST00000607058 2553 ntBASIC19.28■□□□□ 0.68
ZNF550Q7Z398 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF550Q7Z398 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ZNF550Q7Z398 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms