Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.65■□□□□ 0.74
RTL4Q6ZR62 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RTL4Q6ZR62 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RTL4Q6ZR62 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL4Q6ZR62 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RTL4Q6ZR62 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RTL4Q6ZR62 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTL4Q6ZR62 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
RTL4Q6ZR62 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.64■□□□□ 0.73
RTL4Q6ZR62 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.64■□□□□ 0.73
RTL4Q6ZR62 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
RTL4Q6ZR62 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTL4Q6ZR62 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTL4Q6ZR62 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RTL4Q6ZR62 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
RTL4Q6ZR62 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTL4Q6ZR62 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.64■□□□□ 0.73
RTL4Q6ZR62 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RTL4Q6ZR62 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.64■□□□□ 0.73
RTL4Q6ZR62 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTL4Q6ZR62 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.63■□□□□ 0.73
RTL4Q6ZR62 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTL4Q6ZR62 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RTL4Q6ZR62 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.63■□□□□ 0.73
RTL4Q6ZR62 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.63■□□□□ 0.73
RTL4Q6ZR62 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.63■□□□□ 0.73
RTL4Q6ZR62 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.63■□□□□ 0.73
RTL4Q6ZR62 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RTL4Q6ZR62 AC137761.2-201ENST00000561729 223 ntBASIC19.63■□□□□ 0.73
RTL4Q6ZR62 AC145350.3-201ENST00000569033 163 ntBASIC19.63■□□□□ 0.73
RTL4Q6ZR62 AC092437.1-201ENST00000624794 1048 ntBASIC19.63■□□□□ 0.73
RTL4Q6ZR62 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RTL4Q6ZR62 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTL4Q6ZR62 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.63■□□□□ 0.73
RTL4Q6ZR62 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.63■□□□□ 0.73
RTL4Q6ZR62 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTL4Q6ZR62 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
RTL4Q6ZR62 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
RTL4Q6ZR62 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RTL4Q6ZR62 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL4Q6ZR62 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTL4Q6ZR62 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL4Q6ZR62 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RTL4Q6ZR62 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.62■□□□□ 0.73
RTL4Q6ZR62 AP006587.3-201ENST00000525742 1516 ntBASIC19.62■□□□□ 0.73
RTL4Q6ZR62 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.62■□□□□ 0.73
RTL4Q6ZR62 AC016769.1-201ENST00000409132 1010 ntBASIC19.62■□□□□ 0.73
RTL4Q6ZR62 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.62■□□□□ 0.73
RTL4Q6ZR62 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RTL4Q6ZR62 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL4Q6ZR62 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTL4Q6ZR62 AC010542.4-201ENST00000563151 1910 ntBASIC19.62■□□□□ 0.73
RTL4Q6ZR62 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.62■□□□□ 0.73
RTL4Q6ZR62 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL4Q6ZR62 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.62■□□□□ 0.73
RTL4Q6ZR62 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL4Q6ZR62 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL4Q6ZR62 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTL4Q6ZR62 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTL4Q6ZR62 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.62■□□□□ 0.73
RTL4Q6ZR62 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL4Q6ZR62 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL4Q6ZR62 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTL4Q6ZR62 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTL4Q6ZR62 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RTL4Q6ZR62 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTL4Q6ZR62 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.61■□□□□ 0.73
RTL4Q6ZR62 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL4Q6ZR62 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.61■□□□□ 0.73
RTL4Q6ZR62 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.61■□□□□ 0.73
RTL4Q6ZR62 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTL4Q6ZR62 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTL4Q6ZR62 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTL4Q6ZR62 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.61■□□□□ 0.73
RTL4Q6ZR62 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTL4Q6ZR62 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.61■□□□□ 0.73
RTL4Q6ZR62 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RTL4Q6ZR62 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.6■□□□□ 0.73
RTL4Q6ZR62 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.6■□□□□ 0.73
RTL4Q6ZR62 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTL4Q6ZR62 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.6■□□□□ 0.73
RTL4Q6ZR62 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTL4Q6ZR62 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTL4Q6ZR62 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.6■□□□□ 0.73
RTL4Q6ZR62 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.6■□□□□ 0.73
RTL4Q6ZR62 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.6■□□□□ 0.73
RTL4Q6ZR62 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTL4Q6ZR62 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RTL4Q6ZR62 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTL4Q6ZR62 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTL4Q6ZR62 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTL4Q6ZR62 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTL4Q6ZR62 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTL4Q6ZR62 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL4Q6ZR62 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL4Q6ZR62 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RTL4Q6ZR62 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL4Q6ZR62 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTL4Q6ZR62 AC004911.1-201ENST00000416316 871 ntBASIC19.59■□□□□ 0.73
RTL4Q6ZR62 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms