Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCNI2Q6ZMN8 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
CCNI2Q6ZMN8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCNI2Q6ZMN8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CCNI2Q6ZMN8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
CCNI2Q6ZMN8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCNI2Q6ZMN8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCNI2Q6ZMN8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.19■■□□□ 1.14
CCNI2Q6ZMN8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.19■■□□□ 1.14
CCNI2Q6ZMN8 AC099791.1-201ENST00000416440 715 ntBASIC22.19■■□□□ 1.14
CCNI2Q6ZMN8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.19■■□□□ 1.14
CCNI2Q6ZMN8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.19■■□□□ 1.14
CCNI2Q6ZMN8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.19■■□□□ 1.14
CCNI2Q6ZMN8 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.19■■□□□ 1.14
CCNI2Q6ZMN8 AC011298.3-201ENST00000615796 283 ntBASIC22.19■■□□□ 1.14
CCNI2Q6ZMN8 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.19■■□□□ 1.14
CCNI2Q6ZMN8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.19■■□□□ 1.14
CCNI2Q6ZMN8 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.19■■□□□ 1.14
CCNI2Q6ZMN8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC22.19■■□□□ 1.14
CCNI2Q6ZMN8 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CCNI2Q6ZMN8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CCNI2Q6ZMN8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CCNI2Q6ZMN8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCNI2Q6ZMN8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCNI2Q6ZMN8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCNI2Q6ZMN8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CCNI2Q6ZMN8 AL049796.1-201ENST00000565336 1766 ntBASIC22.18■■□□□ 1.14
CCNI2Q6ZMN8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CCNI2Q6ZMN8 AC005703.6-201ENST00000623265 1329 ntBASIC22.18■■□□□ 1.14
CCNI2Q6ZMN8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.18■■□□□ 1.14
CCNI2Q6ZMN8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.18■■□□□ 1.14
CCNI2Q6ZMN8 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.18■■□□□ 1.14
CCNI2Q6ZMN8 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.18■■□□□ 1.14
CCNI2Q6ZMN8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.18■■□□□ 1.14
CCNI2Q6ZMN8 AL138724.1-201ENST00000606771 1088 ntBASIC22.18■■□□□ 1.14
CCNI2Q6ZMN8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.18■■□□□ 1.14
CCNI2Q6ZMN8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC22.18■■□□□ 1.14
CCNI2Q6ZMN8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
CCNI2Q6ZMN8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.17■■□□□ 1.14
CCNI2Q6ZMN8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCNI2Q6ZMN8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCNI2Q6ZMN8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CCNI2Q6ZMN8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.17■■□□□ 1.14
CCNI2Q6ZMN8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.17■■□□□ 1.14
CCNI2Q6ZMN8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.17■■□□□ 1.14
CCNI2Q6ZMN8 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.17■■□□□ 1.14
CCNI2Q6ZMN8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCNI2Q6ZMN8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCNI2Q6ZMN8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.17■■□□□ 1.14
CCNI2Q6ZMN8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCNI2Q6ZMN8 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC22.17■■□□□ 1.14
CCNI2Q6ZMN8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CCNI2Q6ZMN8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.16■■□□□ 1.14
CCNI2Q6ZMN8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.16■■□□□ 1.14
CCNI2Q6ZMN8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCNI2Q6ZMN8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCNI2Q6ZMN8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCNI2Q6ZMN8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
CCNI2Q6ZMN8 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.16■■□□□ 1.14
CCNI2Q6ZMN8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CCNI2Q6ZMN8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CCNI2Q6ZMN8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.16■■□□□ 1.14
CCNI2Q6ZMN8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CCNI2Q6ZMN8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CCNI2Q6ZMN8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCNI2Q6ZMN8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
CCNI2Q6ZMN8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC22.15■■□□□ 1.14
CCNI2Q6ZMN8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCNI2Q6ZMN8 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.15■■□□□ 1.14
CCNI2Q6ZMN8 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC22.15■■□□□ 1.14
CCNI2Q6ZMN8 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.15■■□□□ 1.14
CCNI2Q6ZMN8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.15■■□□□ 1.14
CCNI2Q6ZMN8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.15■■□□□ 1.14
CCNI2Q6ZMN8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CCNI2Q6ZMN8 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
CCNI2Q6ZMN8 GABARAPL3-202ENST00000624044 1851 ntBASIC22.15■■□□□ 1.14
CCNI2Q6ZMN8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.15■■□□□ 1.14
CCNI2Q6ZMN8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CCNI2Q6ZMN8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
CCNI2Q6ZMN8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CCNI2Q6ZMN8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
CCNI2Q6ZMN8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CCNI2Q6ZMN8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCNI2Q6ZMN8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CCNI2Q6ZMN8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.14■■□□□ 1.13
CCNI2Q6ZMN8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.14■■□□□ 1.13
CCNI2Q6ZMN8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
CCNI2Q6ZMN8 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.14■■□□□ 1.13
CCNI2Q6ZMN8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCNI2Q6ZMN8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCNI2Q6ZMN8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCNI2Q6ZMN8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.13■■□□□ 1.13
CCNI2Q6ZMN8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CCNI2Q6ZMN8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
CCNI2Q6ZMN8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.13■■□□□ 1.13
CCNI2Q6ZMN8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.13■■□□□ 1.13
CCNI2Q6ZMN8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCNI2Q6ZMN8 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CCNI2Q6ZMN8 ID1-201ENST00000376105 1233 ntBASIC22.13■■□□□ 1.13
CCNI2Q6ZMN8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms