Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
NHLRC1Q6VVB1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.86■□□□□ 0.61
NHLRC1Q6VVB1 EEF1DP3-203ENST00000566025 782 ntBASIC18.86■□□□□ 0.61
NHLRC1Q6VVB1 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.86■□□□□ 0.61
NHLRC1Q6VVB1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NHLRC1Q6VVB1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.86■□□□□ 0.61
NHLRC1Q6VVB1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NHLRC1Q6VVB1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NHLRC1Q6VVB1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NHLRC1Q6VVB1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NHLRC1Q6VVB1 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
NHLRC1Q6VVB1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NHLRC1Q6VVB1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.85■□□□□ 0.61
NHLRC1Q6VVB1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NHLRC1Q6VVB1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.85■□□□□ 0.61
NHLRC1Q6VVB1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NHLRC1Q6VVB1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.85■□□□□ 0.61
NHLRC1Q6VVB1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.85■□□□□ 0.61
NHLRC1Q6VVB1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NHLRC1Q6VVB1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.85■□□□□ 0.61
NHLRC1Q6VVB1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NHLRC1Q6VVB1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.85■□□□□ 0.61
NHLRC1Q6VVB1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NHLRC1Q6VVB1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NHLRC1Q6VVB1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NHLRC1Q6VVB1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NHLRC1Q6VVB1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.85■□□□□ 0.61
NHLRC1Q6VVB1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NHLRC1Q6VVB1 FEM1AP4-201ENST00000443167 1987 ntBASIC18.84■□□□□ 0.61
NHLRC1Q6VVB1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NHLRC1Q6VVB1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.84■□□□□ 0.61
NHLRC1Q6VVB1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NHLRC1Q6VVB1 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.84■□□□□ 0.61
NHLRC1Q6VVB1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.84■□□□□ 0.61
NHLRC1Q6VVB1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.84■□□□□ 0.61
NHLRC1Q6VVB1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.84■□□□□ 0.61
NHLRC1Q6VVB1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.84■□□□□ 0.61
NHLRC1Q6VVB1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NHLRC1Q6VVB1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NHLRC1Q6VVB1 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NHLRC1Q6VVB1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.84■□□□□ 0.61
NHLRC1Q6VVB1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.84■□□□□ 0.61
NHLRC1Q6VVB1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NHLRC1Q6VVB1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.83■□□□□ 0.61
NHLRC1Q6VVB1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NHLRC1Q6VVB1 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NHLRC1Q6VVB1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NHLRC1Q6VVB1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NHLRC1Q6VVB1 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NHLRC1Q6VVB1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NHLRC1Q6VVB1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.83■□□□□ 0.61
NHLRC1Q6VVB1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.83■□□□□ 0.6
NHLRC1Q6VVB1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NHLRC1Q6VVB1 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NHLRC1Q6VVB1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.83■□□□□ 0.6
NHLRC1Q6VVB1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.83■□□□□ 0.6
NHLRC1Q6VVB1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.83■□□□□ 0.6
NHLRC1Q6VVB1 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.83■□□□□ 0.6
NHLRC1Q6VVB1 TERF1P2-201ENST00000583350 1212 ntBASIC18.83■□□□□ 0.6
NHLRC1Q6VVB1 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.83■□□□□ 0.6
NHLRC1Q6VVB1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.83■□□□□ 0.6
NHLRC1Q6VVB1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.83■□□□□ 0.6
NHLRC1Q6VVB1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.83■□□□□ 0.6
NHLRC1Q6VVB1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.83■□□□□ 0.6
NHLRC1Q6VVB1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.82■□□□□ 0.6
NHLRC1Q6VVB1 LINC02228-203ENST00000641970 1355 ntBASIC18.82■□□□□ 0.6
NHLRC1Q6VVB1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NHLRC1Q6VVB1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC1Q6VVB1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.82■□□□□ 0.6
NHLRC1Q6VVB1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.82■□□□□ 0.6
NHLRC1Q6VVB1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.82■□□□□ 0.6
NHLRC1Q6VVB1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.82■□□□□ 0.6
NHLRC1Q6VVB1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.82■□□□□ 0.6
NHLRC1Q6VVB1 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC1Q6VVB1 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC1Q6VVB1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
NHLRC1Q6VVB1 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC1Q6VVB1 YBX1P1-201ENST00000445822 960 ntBASIC18.82■□□□□ 0.6
NHLRC1Q6VVB1 AC053503.5-201ENST00000601508 636 ntBASIC18.82■□□□□ 0.6
NHLRC1Q6VVB1 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.82■□□□□ 0.6
NHLRC1Q6VVB1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC1Q6VVB1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC1Q6VVB1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC1Q6VVB1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NHLRC1Q6VVB1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NHLRC1Q6VVB1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NHLRC1Q6VVB1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
NHLRC1Q6VVB1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NHLRC1Q6VVB1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NHLRC1Q6VVB1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.81■□□□□ 0.6
NHLRC1Q6VVB1 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NHLRC1Q6VVB1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NHLRC1Q6VVB1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NHLRC1Q6VVB1 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.81■□□□□ 0.6
NHLRC1Q6VVB1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NHLRC1Q6VVB1 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NHLRC1Q6VVB1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NHLRC1Q6VVB1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.81■□□□□ 0.6
NHLRC1Q6VVB1 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NHLRC1Q6VVB1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms