Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
CASC1Q6TDU7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC25.65■■□□□ 1.7
CASC1Q6TDU7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC25.64■■□□□ 1.7
CASC1Q6TDU7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CASC1Q6TDU7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CASC1Q6TDU7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CASC1Q6TDU7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CASC1Q6TDU7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
CASC1Q6TDU7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CASC1Q6TDU7 MIR638-201ENST00000385237 100 ntBASIC25.64■■□□□ 1.7
CASC1Q6TDU7 FXN-202ENST00000396364 980 ntTSL 5 BASIC25.64■■□□□ 1.7
CASC1Q6TDU7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC25.64■■□□□ 1.7
CASC1Q6TDU7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25.64■■□□□ 1.7
CASC1Q6TDU7 AC091305.1-201ENST00000479476 895 ntBASIC25.64■■□□□ 1.7
CASC1Q6TDU7 SUDS3P1-201ENST00000505831 966 ntBASIC25.64■■□□□ 1.7
CASC1Q6TDU7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.64■■□□□ 1.7
CASC1Q6TDU7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
CASC1Q6TDU7 AC005837.3-201ENST00000612163 286 ntBASIC25.64■■□□□ 1.7
CASC1Q6TDU7 AL136967.2-201ENST00000623968 743 ntBASIC25.64■■□□□ 1.7
CASC1Q6TDU7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CASC1Q6TDU7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
CASC1Q6TDU7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC25.64■■□□□ 1.69
CASC1Q6TDU7 RASA4CP-201ENST00000424092 1398 ntBASIC25.64■■□□□ 1.69
CASC1Q6TDU7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC25.64■■□□□ 1.69
CASC1Q6TDU7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CASC1Q6TDU7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
CASC1Q6TDU7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
CASC1Q6TDU7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC25.64■■□□□ 1.69
CASC1Q6TDU7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
CASC1Q6TDU7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CASC1Q6TDU7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC25.63■■□□□ 1.69
CASC1Q6TDU7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC25.63■■□□□ 1.69
CASC1Q6TDU7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
CASC1Q6TDU7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC25.63■■□□□ 1.69
CASC1Q6TDU7 AC142381.2-201ENST00000566120 298 ntBASIC25.63■■□□□ 1.69
CASC1Q6TDU7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CASC1Q6TDU7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
CASC1Q6TDU7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CASC1Q6TDU7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
CASC1Q6TDU7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CASC1Q6TDU7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.62■■□□□ 1.69
CASC1Q6TDU7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CASC1Q6TDU7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.62■■□□□ 1.69
CASC1Q6TDU7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CASC1Q6TDU7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC25.62■■□□□ 1.69
CASC1Q6TDU7 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CASC1Q6TDU7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CASC1Q6TDU7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
CASC1Q6TDU7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CASC1Q6TDU7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC25.61■■□□□ 1.69
CASC1Q6TDU7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CASC1Q6TDU7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CASC1Q6TDU7 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CASC1Q6TDU7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC25.61■■□□□ 1.69
CASC1Q6TDU7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
CASC1Q6TDU7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CASC1Q6TDU7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC25.6■■□□□ 1.69
CASC1Q6TDU7 BX005040.4-201ENST00000637145 1518 ntBASIC25.6■■□□□ 1.69
CASC1Q6TDU7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CASC1Q6TDU7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.6■■□□□ 1.69
CASC1Q6TDU7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
CASC1Q6TDU7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CASC1Q6TDU7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC25.6■■□□□ 1.69
CASC1Q6TDU7 AC005224.4-201ENST00000583262 1652 ntBASIC25.6■■□□□ 1.69
CASC1Q6TDU7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CASC1Q6TDU7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CASC1Q6TDU7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CASC1Q6TDU7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
CASC1Q6TDU7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC25.6■■□□□ 1.69
CASC1Q6TDU7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CASC1Q6TDU7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
CASC1Q6TDU7 AC055733.4-201ENST00000638462 1354 ntBASIC25.59■■□□□ 1.69
CASC1Q6TDU7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CASC1Q6TDU7 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CASC1Q6TDU7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CASC1Q6TDU7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CASC1Q6TDU7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CASC1Q6TDU7 MIR572-201ENST00000384983 95 ntBASIC25.58■■□□□ 1.69
CASC1Q6TDU7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.58■■□□□ 1.69
CASC1Q6TDU7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.58■■□□□ 1.69
CASC1Q6TDU7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC25.58■■□□□ 1.69
CASC1Q6TDU7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
CASC1Q6TDU7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CASC1Q6TDU7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CASC1Q6TDU7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.58■■□□□ 1.69
CASC1Q6TDU7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.68
CASC1Q6TDU7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
CASC1Q6TDU7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CASC1Q6TDU7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
CASC1Q6TDU7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC25.57■■□□□ 1.68
CASC1Q6TDU7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CASC1Q6TDU7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
CASC1Q6TDU7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
CASC1Q6TDU7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CASC1Q6TDU7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.57■■□□□ 1.68
CASC1Q6TDU7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
CASC1Q6TDU7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CASC1Q6TDU7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
CASC1Q6TDU7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
CASC1Q6TDU7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms