Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TMEM88Q6PEY1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
TMEM88Q6PEY1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.89■□□□□ 0.3
TMEM88Q6PEY1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
TMEM88Q6PEY1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TMEM88Q6PEY1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TMEM88Q6PEY1 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
TMEM88Q6PEY1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88Q6PEY1 TNXA-203ENST00000507684 2038 ntBASIC16.89■□□□□ 0.29
TMEM88Q6PEY1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88Q6PEY1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88Q6PEY1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88Q6PEY1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88Q6PEY1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88Q6PEY1 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88Q6PEY1 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM88Q6PEY1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88Q6PEY1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88Q6PEY1 RARRES2P1-201ENST00000474487 481 ntBASIC16.89■□□□□ 0.29
TMEM88Q6PEY1 AC074183.2-201ENST00000623112 922 ntBASIC16.89■□□□□ 0.29
TMEM88Q6PEY1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88Q6PEY1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88Q6PEY1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
TMEM88Q6PEY1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.89■□□□□ 0.29
TMEM88Q6PEY1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88Q6PEY1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TMEM88Q6PEY1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.89■□□□□ 0.29
TMEM88Q6PEY1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC16.88■□□□□ 0.29
TMEM88Q6PEY1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88Q6PEY1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88Q6PEY1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TMEM88Q6PEY1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88Q6PEY1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TMEM88Q6PEY1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88Q6PEY1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88Q6PEY1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88Q6PEY1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM88Q6PEY1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.88■□□□□ 0.29
TMEM88Q6PEY1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88Q6PEY1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88Q6PEY1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88Q6PEY1 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88Q6PEY1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88Q6PEY1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88Q6PEY1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88Q6PEY1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88Q6PEY1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88Q6PEY1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.88■□□□□ 0.29
TMEM88Q6PEY1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TMEM88Q6PEY1 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 KRT8P33-201ENST00000508125 1423 ntBASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TMEM88Q6PEY1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88Q6PEY1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88Q6PEY1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88Q6PEY1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88Q6PEY1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88Q6PEY1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TMEM88Q6PEY1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88Q6PEY1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88Q6PEY1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM88Q6PEY1 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC16.86■□□□□ 0.29
TMEM88Q6PEY1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TMEM88Q6PEY1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms