Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LYSMD4Q5XG99 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LYSMD4Q5XG99 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LYSMD4Q5XG99 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.77■□□□□ 0.92
LYSMD4Q5XG99 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.77■□□□□ 0.92
LYSMD4Q5XG99 CYP2T3P-201ENST00000601990 817 ntBASIC20.77■□□□□ 0.92
LYSMD4Q5XG99 AC100791.3-201ENST00000617619 330 ntBASIC20.77■□□□□ 0.92
LYSMD4Q5XG99 AL359736.2-201ENST00000621992 437 ntBASIC20.77■□□□□ 0.92
LYSMD4Q5XG99 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
LYSMD4Q5XG99 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.77■□□□□ 0.91
LYSMD4Q5XG99 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.77■□□□□ 0.91
LYSMD4Q5XG99 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
LYSMD4Q5XG99 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
LYSMD4Q5XG99 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.76■□□□□ 0.91
LYSMD4Q5XG99 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LYSMD4Q5XG99 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LYSMD4Q5XG99 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.76■□□□□ 0.91
LYSMD4Q5XG99 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
LYSMD4Q5XG99 AC245052.3-201ENST00000450182 901 ntBASIC20.76■□□□□ 0.91
LYSMD4Q5XG99 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
LYSMD4Q5XG99 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.76■□□□□ 0.91
LYSMD4Q5XG99 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.76■□□□□ 0.91
LYSMD4Q5XG99 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
LYSMD4Q5XG99 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
LYSMD4Q5XG99 HLA-B-256ENST00000639848 1089 ntBASIC20.76■□□□□ 0.91
LYSMD4Q5XG99 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LYSMD4Q5XG99 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LYSMD4Q5XG99 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LYSMD4Q5XG99 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LYSMD4Q5XG99 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
LYSMD4Q5XG99 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
LYSMD4Q5XG99 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LYSMD4Q5XG99 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LYSMD4Q5XG99 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LYSMD4Q5XG99 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LYSMD4Q5XG99 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.75■□□□□ 0.91
LYSMD4Q5XG99 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
LYSMD4Q5XG99 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.75■□□□□ 0.91
LYSMD4Q5XG99 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LYSMD4Q5XG99 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LYSMD4Q5XG99 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.74■□□□□ 0.91
LYSMD4Q5XG99 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.74■□□□□ 0.91
LYSMD4Q5XG99 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LYSMD4Q5XG99 MIR718-201ENST00000390190 70 ntBASIC20.74■□□□□ 0.91
LYSMD4Q5XG99 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
LYSMD4Q5XG99 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.74■□□□□ 0.91
LYSMD4Q5XG99 AC091799.1-201ENST00000422823 811 ntBASIC20.74■□□□□ 0.91
LYSMD4Q5XG99 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.74■□□□□ 0.91
LYSMD4Q5XG99 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.74■□□□□ 0.91
LYSMD4Q5XG99 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LYSMD4Q5XG99 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LYSMD4Q5XG99 AC008403.3-201ENST00000598924 454 ntBASIC20.74■□□□□ 0.91
LYSMD4Q5XG99 AL589743.5-201ENST00000616611 1050 ntBASIC20.74■□□□□ 0.91
LYSMD4Q5XG99 FAM197Y4-202ENST00000622692 608 ntBASIC20.74■□□□□ 0.91
LYSMD4Q5XG99 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.74■□□□□ 0.91
LYSMD4Q5XG99 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.74■□□□□ 0.91
LYSMD4Q5XG99 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LYSMD4Q5XG99 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LYSMD4Q5XG99 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LYSMD4Q5XG99 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
LYSMD4Q5XG99 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.72■□□□□ 0.91
LYSMD4Q5XG99 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LYSMD4Q5XG99 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LYSMD4Q5XG99 AC003102.1-202ENST00000563394 1796 ntBASIC20.72■□□□□ 0.91
LYSMD4Q5XG99 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
LYSMD4Q5XG99 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LYSMD4Q5XG99 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LYSMD4Q5XG99 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LYSMD4Q5XG99 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
LYSMD4Q5XG99 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LYSMD4Q5XG99 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LYSMD4Q5XG99 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.72■□□□□ 0.91
LYSMD4Q5XG99 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.72■□□□□ 0.91
LYSMD4Q5XG99 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LYSMD4Q5XG99 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.72■□□□□ 0.91
LYSMD4Q5XG99 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LYSMD4Q5XG99 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LYSMD4Q5XG99 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms