Protein–RNA interactions for Protein: Q5MAI5

CDKL4, Cyclin-dependent kinase-like 4, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL4Q5MAI5 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
CDKL4Q5MAI5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDKL4Q5MAI5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL4Q5MAI5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL4Q5MAI5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.39■□□□□ 0.85
CDKL4Q5MAI5 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.39■□□□□ 0.85
CDKL4Q5MAI5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CDKL4Q5MAI5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.39■□□□□ 0.85
CDKL4Q5MAI5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CDKL4Q5MAI5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL4Q5MAI5 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL4Q5MAI5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDKL4Q5MAI5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CDKL4Q5MAI5 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL4Q5MAI5 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.38■□□□□ 0.85
CDKL4Q5MAI5 AP004607.4-201ENST00000530158 1459 ntBASIC20.38■□□□□ 0.85
CDKL4Q5MAI5 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL4Q5MAI5 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL4Q5MAI5 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
CDKL4Q5MAI5 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.38■□□□□ 0.85
CDKL4Q5MAI5 AC138907.5-202ENST00000569484 235 ntBASIC20.38■□□□□ 0.85
CDKL4Q5MAI5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.38■□□□□ 0.85
CDKL4Q5MAI5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL4Q5MAI5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL4Q5MAI5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.38■□□□□ 0.85
CDKL4Q5MAI5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.38■□□□□ 0.85
CDKL4Q5MAI5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CDKL4Q5MAI5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL4Q5MAI5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDKL4Q5MAI5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.37■□□□□ 0.85
CDKL4Q5MAI5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL4Q5MAI5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL4Q5MAI5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL4Q5MAI5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.37■□□□□ 0.85
CDKL4Q5MAI5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.37■□□□□ 0.85
CDKL4Q5MAI5 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL4Q5MAI5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CDKL4Q5MAI5 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL4Q5MAI5 AC008175.2-201ENST00000612840 297 ntBASIC20.37■□□□□ 0.85
CDKL4Q5MAI5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL4Q5MAI5 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL4Q5MAI5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL4Q5MAI5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL4Q5MAI5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDKL4Q5MAI5 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.36■□□□□ 0.85
CDKL4Q5MAI5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
CDKL4Q5MAI5 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL4Q5MAI5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.36■□□□□ 0.85
CDKL4Q5MAI5 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL4Q5MAI5 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL4Q5MAI5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDKL4Q5MAI5 YBX1P1-201ENST00000445822 960 ntBASIC20.36■□□□□ 0.85
CDKL4Q5MAI5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.36■□□□□ 0.85
CDKL4Q5MAI5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.36■□□□□ 0.85
CDKL4Q5MAI5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.36■□□□□ 0.85
CDKL4Q5MAI5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.36■□□□□ 0.85
CDKL4Q5MAI5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.35■□□□□ 0.85
CDKL4Q5MAI5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.35■□□□□ 0.85
CDKL4Q5MAI5 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CDKL4Q5MAI5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CDKL4Q5MAI5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.35■□□□□ 0.85
CDKL4Q5MAI5 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.35■□□□□ 0.85
CDKL4Q5MAI5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.35■□□□□ 0.85
CDKL4Q5MAI5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL4Q5MAI5 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL4Q5MAI5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.35■□□□□ 0.85
CDKL4Q5MAI5 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL4Q5MAI5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CDKL4Q5MAI5 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.35■□□□□ 0.85
CDKL4Q5MAI5 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.35■□□□□ 0.85
CDKL4Q5MAI5 TERF1P2-201ENST00000583350 1212 ntBASIC20.35■□□□□ 0.85
CDKL4Q5MAI5 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.35■□□□□ 0.85
CDKL4Q5MAI5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL4Q5MAI5 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDKL4Q5MAI5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CDKL4Q5MAI5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CDKL4Q5MAI5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDKL4Q5MAI5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDKL4Q5MAI5 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CDKL4Q5MAI5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.34■□□□□ 0.85
CDKL4Q5MAI5 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDKL4Q5MAI5 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDKL4Q5MAI5 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDKL4Q5MAI5 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDKL4Q5MAI5 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.33■□□□□ 0.85
CDKL4Q5MAI5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDKL4Q5MAI5 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDKL4Q5MAI5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CDKL4Q5MAI5 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDKL4Q5MAI5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDKL4Q5MAI5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDKL4Q5MAI5 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDKL4Q5MAI5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.33■□□□□ 0.85
CDKL4Q5MAI5 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDKL4Q5MAI5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.33■□□□□ 0.84
CDKL4Q5MAI5 AC061975.6-201ENST00000579045 1553 ntBASIC20.33■□□□□ 0.84
CDKL4Q5MAI5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CDKL4Q5MAI5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CDKL4Q5MAI5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.32■□□□□ 0.84
CDKL4Q5MAI5 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms