Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PTPN20Q4JDL3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PTPN20Q4JDL3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PTPN20Q4JDL3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PTPN20Q4JDL3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PTPN20Q4JDL3 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC22.17■■□□□ 1.14
PTPN20Q4JDL3 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.17■■□□□ 1.14
PTPN20Q4JDL3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC22.17■■□□□ 1.14
PTPN20Q4JDL3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.17■■□□□ 1.14
PTPN20Q4JDL3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PTPN20Q4JDL3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PTPN20Q4JDL3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PTPN20Q4JDL3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
PTPN20Q4JDL3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.17■■□□□ 1.14
PTPN20Q4JDL3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PTPN20Q4JDL3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
PTPN20Q4JDL3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC22.16■■□□□ 1.14
PTPN20Q4JDL3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
PTPN20Q4JDL3 AC034268.1-201ENST00000441047 882 ntBASIC22.16■■□□□ 1.14
PTPN20Q4JDL3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
PTPN20Q4JDL3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
PTPN20Q4JDL3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
PTPN20Q4JDL3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PTPN20Q4JDL3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC22.16■■□□□ 1.14
PTPN20Q4JDL3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PTPN20Q4JDL3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PTPN20Q4JDL3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22.16■■□□□ 1.14
PTPN20Q4JDL3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.15■■□□□ 1.14
PTPN20Q4JDL3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
PTPN20Q4JDL3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PTPN20Q4JDL3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.15■■□□□ 1.14
PTPN20Q4JDL3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
PTPN20Q4JDL3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PTPN20Q4JDL3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PTPN20Q4JDL3 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.15■■□□□ 1.14
PTPN20Q4JDL3 AC010141.2-201ENST00000452426 721 ntBASIC22.15■■□□□ 1.14
PTPN20Q4JDL3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.15■■□□□ 1.14
PTPN20Q4JDL3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
PTPN20Q4JDL3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.15■■□□□ 1.14
PTPN20Q4JDL3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.15■■□□□ 1.14
PTPN20Q4JDL3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.15■■□□□ 1.14
PTPN20Q4JDL3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.15■■□□□ 1.14
PTPN20Q4JDL3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
PTPN20Q4JDL3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PTPN20Q4JDL3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.15■■□□□ 1.14
PTPN20Q4JDL3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC22.14■■□□□ 1.14
PTPN20Q4JDL3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC22.14■■□□□ 1.13
PTPN20Q4JDL3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.14■■□□□ 1.13
PTPN20Q4JDL3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.14■■□□□ 1.13
PTPN20Q4JDL3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
PTPN20Q4JDL3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PTPN20Q4JDL3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC22.14■■□□□ 1.13
PTPN20Q4JDL3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.14■■□□□ 1.13
PTPN20Q4JDL3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.13
PTPN20Q4JDL3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
PTPN20Q4JDL3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.13■■□□□ 1.13
PTPN20Q4JDL3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.13■■□□□ 1.13
PTPN20Q4JDL3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.13■■□□□ 1.13
PTPN20Q4JDL3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.13■■□□□ 1.13
PTPN20Q4JDL3 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.13■■□□□ 1.13
PTPN20Q4JDL3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.13■■□□□ 1.13
PTPN20Q4JDL3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.13■■□□□ 1.13
PTPN20Q4JDL3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
PTPN20Q4JDL3 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
PTPN20Q4JDL3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
PTPN20Q4JDL3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PTPN20Q4JDL3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.13■■□□□ 1.13
PTPN20Q4JDL3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PTPN20Q4JDL3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
PTPN20Q4JDL3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
PTPN20Q4JDL3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.13■■□□□ 1.13
PTPN20Q4JDL3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PTPN20Q4JDL3 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PTPN20Q4JDL3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PTPN20Q4JDL3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PTPN20Q4JDL3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.12■■□□□ 1.13
PTPN20Q4JDL3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.12■■□□□ 1.13
PTPN20Q4JDL3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
PTPN20Q4JDL3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.12■■□□□ 1.13
PTPN20Q4JDL3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PTPN20Q4JDL3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.12■■□□□ 1.13
PTPN20Q4JDL3 AP001160.3-201ENST00000601484 763 ntBASIC22.12■■□□□ 1.13
PTPN20Q4JDL3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PTPN20Q4JDL3 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PTPN20Q4JDL3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
PTPN20Q4JDL3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PTPN20Q4JDL3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PTPN20Q4JDL3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC22.12■■□□□ 1.13
PTPN20Q4JDL3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PTPN20Q4JDL3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTPN20Q4JDL3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTPN20Q4JDL3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.11■■□□□ 1.13
PTPN20Q4JDL3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
PTPN20Q4JDL3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PTPN20Q4JDL3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.11■■□□□ 1.13
PTPN20Q4JDL3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
PTPN20Q4JDL3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
PTPN20Q4JDL3 AL049796.1-201ENST00000565336 1766 ntBASIC22.11■■□□□ 1.13
PTPN20Q4JDL3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.11■■□□□ 1.13
PTPN20Q4JDL3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms