Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 AC138907.5-202ENST00000569484 235 ntBASIC18.58■□□□□ 0.56
HIST3H3Q16695 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.58■□□□□ 0.56
HIST3H3Q16695 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.58■□□□□ 0.56
HIST3H3Q16695 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIST3H3Q16695 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIST3H3Q16695 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIST3H3Q16695 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
HIST3H3Q16695 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
HIST3H3Q16695 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST3H3Q16695 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST3H3Q16695 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST3H3Q16695 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.57■□□□□ 0.56
HIST3H3Q16695 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HIST3H3Q16695 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.57■□□□□ 0.56
HIST3H3Q16695 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST3H3Q16695 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
HIST3H3Q16695 KRT18P14-201ENST00000534205 1250 ntBASIC18.57■□□□□ 0.56
HIST3H3Q16695 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST3H3Q16695 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST3H3Q16695 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.57■□□□□ 0.56
HIST3H3Q16695 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HIST3H3Q16695 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIST3H3Q16695 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC18.56■□□□□ 0.56
HIST3H3Q16695 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.56■□□□□ 0.56
HIST3H3Q16695 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HIST3H3Q16695 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.56■□□□□ 0.56
HIST3H3Q16695 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.56■□□□□ 0.56
HIST3H3Q16695 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIST3H3Q16695 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
HIST3H3Q16695 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.56■□□□□ 0.56
HIST3H3Q16695 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST3H3Q16695 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HIST3H3Q16695 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HIST3H3Q16695 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.55■□□□□ 0.56
HIST3H3Q16695 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.55■□□□□ 0.56
HIST3H3Q16695 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.55■□□□□ 0.56
HIST3H3Q16695 AC061975.6-201ENST00000579045 1553 ntBASIC18.55■□□□□ 0.56
HIST3H3Q16695 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.55■□□□□ 0.56
HIST3H3Q16695 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HIST3H3Q16695 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H3Q16695 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H3Q16695 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H3Q16695 POU5F1P4-201ENST00000413175 1085 ntBASIC18.54■□□□□ 0.56
HIST3H3Q16695 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.54■□□□□ 0.56
HIST3H3Q16695 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.54■□□□□ 0.56
HIST3H3Q16695 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.54■□□□□ 0.56
HIST3H3Q16695 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.54■□□□□ 0.56
HIST3H3Q16695 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.54■□□□□ 0.56
HIST3H3Q16695 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HIST3H3Q16695 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H3Q16695 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H3Q16695 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.54■□□□□ 0.56
HIST3H3Q16695 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H3Q16695 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HIST3H3Q16695 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.54■□□□□ 0.56
HIST3H3Q16695 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST3H3Q16695 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST3H3Q16695 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
HIST3H3Q16695 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST3H3Q16695 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST3H3Q16695 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.53■□□□□ 0.56
HIST3H3Q16695 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.53■□□□□ 0.56
HIST3H3Q16695 AC097381.1-201ENST00000429019 1296 ntBASIC18.53■□□□□ 0.56
HIST3H3Q16695 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.53■□□□□ 0.56
HIST3H3Q16695 AC010141.2-201ENST00000452426 721 ntBASIC18.53■□□□□ 0.56
HIST3H3Q16695 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST3H3Q16695 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
HIST3H3Q16695 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.53■□□□□ 0.56
HIST3H3Q16695 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST3H3Q16695 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
HIST3H3Q16695 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
HIST3H3Q16695 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.53■□□□□ 0.56
HIST3H3Q16695 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST3H3Q16695 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
HIST3H3Q16695 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
HIST3H3Q16695 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
HIST3H3Q16695 AP004607.4-201ENST00000530158 1459 ntBASIC18.52■□□□□ 0.56
HIST3H3Q16695 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
HIST3H3Q16695 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.52■□□□□ 0.56
HIST3H3Q16695 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
HIST3H3Q16695 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HIST3H3Q16695 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HIST3H3Q16695 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HIST3H3Q16695 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
HIST3H3Q16695 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HIST3H3Q16695 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.52■□□□□ 0.56
HIST3H3Q16695 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.52■□□□□ 0.56
HIST3H3Q16695 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.52■□□□□ 0.56
HIST3H3Q16695 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HIST3H3Q16695 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
HIST3H3Q16695 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HIST3H3Q16695 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.52■□□□□ 0.56
HIST3H3Q16695 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.52■□□□□ 0.56
HIST3H3Q16695 AC008175.2-201ENST00000612840 297 ntBASIC18.52■□□□□ 0.56
HIST3H3Q16695 MIR6821-201ENST00000617625 74 ntBASIC18.52■□□□□ 0.56
HIST3H3Q16695 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
HIST3H3Q16695 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
HIST3H3Q16695 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.52■□□□□ 0.55
HIST3H3Q16695 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
HIST3H3Q16695 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms