Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HIST1H1AQ02539 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC16.01■□□□□ 0.15
HIST1H1AQ02539 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
HIST1H1AQ02539 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST1H1AQ02539 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HIST1H1AQ02539 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST1H1AQ02539 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST1H1AQ02539 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16■□□□□ 0.15
HIST1H1AQ02539 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST1H1AQ02539 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST1H1AQ02539 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
HIST1H1AQ02539 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16■□□□□ 0.15
HIST1H1AQ02539 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16■□□□□ 0.15
HIST1H1AQ02539 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST1H1AQ02539 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16■□□□□ 0.15
HIST1H1AQ02539 AP005435.1-201ENST00000529293 1178 ntBASIC16■□□□□ 0.15
HIST1H1AQ02539 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16■□□□□ 0.15
HIST1H1AQ02539 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST1H1AQ02539 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST1H1AQ02539 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HIST1H1AQ02539 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16■□□□□ 0.15
HIST1H1AQ02539 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
HIST1H1AQ02539 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
HIST1H1AQ02539 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16■□□□□ 0.15
HIST1H1AQ02539 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST1H1AQ02539 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST1H1AQ02539 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HIST1H1AQ02539 AC026471.6-201ENST00000622954 1905 ntBASIC16■□□□□ 0.15
HIST1H1AQ02539 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H1AQ02539 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H1AQ02539 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H1AQ02539 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H1AQ02539 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.99■□□□□ 0.15
HIST1H1AQ02539 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H1AQ02539 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H1AQ02539 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST1H1AQ02539 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H1AQ02539 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
HIST1H1AQ02539 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
HIST1H1AQ02539 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H1AQ02539 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.99■□□□□ 0.15
HIST1H1AQ02539 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC15.99■□□□□ 0.15
HIST1H1AQ02539 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H1AQ02539 AL034346.1-201ENST00000568244 1277 ntBASIC15.99■□□□□ 0.15
HIST1H1AQ02539 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC15.99■□□□□ 0.15
HIST1H1AQ02539 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H1AQ02539 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H1AQ02539 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
HIST1H1AQ02539 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC15.98■□□□□ 0.15
HIST1H1AQ02539 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
HIST1H1AQ02539 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H1AQ02539 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H1AQ02539 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
HIST1H1AQ02539 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
HIST1H1AQ02539 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H1AQ02539 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
HIST1H1AQ02539 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H1AQ02539 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.98■□□□□ 0.15
HIST1H1AQ02539 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.98■□□□□ 0.15
HIST1H1AQ02539 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
HIST1H1AQ02539 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
HIST1H1AQ02539 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC15.98■□□□□ 0.15
HIST1H1AQ02539 AP004607.7-201ENST00000527152 1677 ntBASIC15.98■□□□□ 0.15
HIST1H1AQ02539 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H1AQ02539 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
HIST1H1AQ02539 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
HIST1H1AQ02539 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 STX6-204ENST00000542060 4809 ntTSL 2 BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 UNC93B3-201ENST00000308076 687 ntBASIC15.97■□□□□ 0.15
HIST1H1AQ02539 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 MIR4767-201ENST00000582827 78 ntBASIC15.97■□□□□ 0.15
HIST1H1AQ02539 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HIST1H1AQ02539 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H1AQ02539 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H1AQ02539 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H1AQ02539 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.96■□□□□ 0.15
HIST1H1AQ02539 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HIST1H1AQ02539 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms