Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 KRT17P1-201ENST00000399211 1546 ntBASIC19.69■□□□□ 0.74
CACNA1BQ00975 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CACNA1BQ00975 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA1BQ00975 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA1BQ00975 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CACNA1BQ00975 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA1BQ00975 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA1BQ00975 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.69■□□□□ 0.74
CACNA1BQ00975 CLEC4GP1-201ENST00000596555 870 ntBASIC19.69■□□□□ 0.74
CACNA1BQ00975 AL691432.3-201ENST00000621860 400 ntBASIC19.69■□□□□ 0.74
CACNA1BQ00975 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.69■□□□□ 0.74
CACNA1BQ00975 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA1BQ00975 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CACNA1BQ00975 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CACNA1BQ00975 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CACNA1BQ00975 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CACNA1BQ00975 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.68■□□□□ 0.74
CACNA1BQ00975 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.68■□□□□ 0.74
CACNA1BQ00975 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.68■□□□□ 0.74
CACNA1BQ00975 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.68■□□□□ 0.74
CACNA1BQ00975 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CACNA1BQ00975 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC19.68■□□□□ 0.74
CACNA1BQ00975 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.68■□□□□ 0.74
CACNA1BQ00975 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CACNA1BQ00975 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CACNA1BQ00975 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CACNA1BQ00975 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
CACNA1BQ00975 AL355472.2-201ENST00000422958 438 ntBASIC19.68■□□□□ 0.74
CACNA1BQ00975 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CACNA1BQ00975 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.68■□□□□ 0.74
CACNA1BQ00975 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CACNA1BQ00975 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.68■□□□□ 0.74
CACNA1BQ00975 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CACNA1BQ00975 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.67■□□□□ 0.74
CACNA1BQ00975 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.67■□□□□ 0.74
CACNA1BQ00975 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.67■□□□□ 0.74
CACNA1BQ00975 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CACNA1BQ00975 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.67■□□□□ 0.74
CACNA1BQ00975 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.67■□□□□ 0.74
CACNA1BQ00975 AC026471.5-201ENST00000615068 467 ntBASIC19.67■□□□□ 0.74
CACNA1BQ00975 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
CACNA1BQ00975 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CACNA1BQ00975 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
CACNA1BQ00975 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.67■□□□□ 0.74
CACNA1BQ00975 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CACNA1BQ00975 PVRIG2P-201ENST00000435460 978 ntBASIC19.67■□□□□ 0.74
CACNA1BQ00975 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
CACNA1BQ00975 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.67■□□□□ 0.74
CACNA1BQ00975 AL591742.1-201ENST00000604433 565 ntBASIC19.67■□□□□ 0.74
CACNA1BQ00975 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.67■□□□□ 0.74
CACNA1BQ00975 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA1BQ00975 LINC01568-207ENST00000641790 1380 ntBASIC19.66■□□□□ 0.74
CACNA1BQ00975 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA1BQ00975 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA1BQ00975 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CACNA1BQ00975 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC19.66■□□□□ 0.74
CACNA1BQ00975 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
CACNA1BQ00975 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
CACNA1BQ00975 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.66■□□□□ 0.74
CACNA1BQ00975 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.66■□□□□ 0.74
CACNA1BQ00975 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.66■□□□□ 0.74
CACNA1BQ00975 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.66■□□□□ 0.74
CACNA1BQ00975 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CACNA1BQ00975 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CACNA1BQ00975 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA1BQ00975 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.66■□□□□ 0.74
CACNA1BQ00975 AL023875.1-201ENST00000640777 796 ntBASIC19.66■□□□□ 0.74
CACNA1BQ00975 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.66■□□□□ 0.74
CACNA1BQ00975 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.66■□□□□ 0.74
CACNA1BQ00975 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CACNA1BQ00975 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC19.65■□□□□ 0.74
CACNA1BQ00975 AC092368.3-202ENST00000574180 1591 ntBASIC19.65■□□□□ 0.74
CACNA1BQ00975 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1BQ00975 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.65■□□□□ 0.74
CACNA1BQ00975 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1BQ00975 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1BQ00975 SLC25A3P1-201ENST00000443844 931 ntBASIC19.65■□□□□ 0.74
CACNA1BQ00975 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.65■□□□□ 0.74
CACNA1BQ00975 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CACNA1BQ00975 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
CACNA1BQ00975 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA1BQ00975 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.65■□□□□ 0.74
CACNA1BQ00975 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
CACNA1BQ00975 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CACNA1BQ00975 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.64■□□□□ 0.74
CACNA1BQ00975 HCG4P8-203ENST00000443049 980 ntBASIC19.64■□□□□ 0.74
CACNA1BQ00975 AC104076.2-201ENST00000448912 469 ntBASIC19.64■□□□□ 0.74
CACNA1BQ00975 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.74
CACNA1BQ00975 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.64■□□□□ 0.74
CACNA1BQ00975 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.74
CACNA1BQ00975 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.64■□□□□ 0.74
CACNA1BQ00975 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.64■□□□□ 0.74
CACNA1BQ00975 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.64■□□□□ 0.74
CACNA1BQ00975 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1BQ00975 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1BQ00975 KRT8P10-201ENST00000450021 1447 ntBASIC19.64■□□□□ 0.73
CACNA1BQ00975 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA1BQ00975 AL137013.1-201ENST00000432946 1228 ntBASIC19.64■□□□□ 0.73
CACNA1BQ00975 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.64■□□□□ 0.73
CACNA1BQ00975 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms