Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ACTA1P68133 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ACTA1P68133 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ACTA1P68133 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ACTA1P68133 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.7■□□□□ 0.58
ACTA1P68133 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
ACTA1P68133 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ACTA1P68133 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ACTA1P68133 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ACTA1P68133 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ACTA1P68133 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.7■□□□□ 0.58
ACTA1P68133 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ACTA1P68133 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
ACTA1P68133 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.7■□□□□ 0.58
ACTA1P68133 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ACTA1P68133 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ACTA1P68133 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
ACTA1P68133 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ACTA1P68133 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
ACTA1P68133 AL121603.2-201ENST00000557373 2117 ntBASIC18.7■□□□□ 0.58
ACTA1P68133 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ACTA1P68133 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.69■□□□□ 0.58
ACTA1P68133 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ACTA1P68133 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ACTA1P68133 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ACTA1P68133 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ACTA1P68133 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ACTA1P68133 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.69■□□□□ 0.58
ACTA1P68133 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.69■□□□□ 0.58
ACTA1P68133 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.69■□□□□ 0.58
ACTA1P68133 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ACTA1P68133 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.69■□□□□ 0.58
ACTA1P68133 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
ACTA1P68133 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ACTA1P68133 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ACTA1P68133 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ACTA1P68133 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ACTA1P68133 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ACTA1P68133 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ACTA1P68133 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTA1P68133 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.68■□□□□ 0.58
ACTA1P68133 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTA1P68133 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.68■□□□□ 0.58
ACTA1P68133 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.68■□□□□ 0.58
ACTA1P68133 AP005212.1-201ENST00000581547 1997 ntBASIC18.68■□□□□ 0.58
ACTA1P68133 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTA1P68133 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTA1P68133 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTA1P68133 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ACTA1P68133 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTA1P68133 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.68■□□□□ 0.58
ACTA1P68133 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTA1P68133 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.68■□□□□ 0.58
ACTA1P68133 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.68■□□□□ 0.58
ACTA1P68133 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.68■□□□□ 0.58
ACTA1P68133 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.68■□□□□ 0.58
ACTA1P68133 AC092667.1-201ENST00000434301 2586 ntBASIC18.68■□□□□ 0.58
ACTA1P68133 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACTA1P68133 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ACTA1P68133 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.68■□□□□ 0.58
ACTA1P68133 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTA1P68133 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ACTA1P68133 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ACTA1P68133 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ACTA1P68133 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTA1P68133 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.67■□□□□ 0.58
ACTA1P68133 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.67■□□□□ 0.58
ACTA1P68133 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTA1P68133 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
ACTA1P68133 DUX4L19-201ENST00000557448 1267 ntBASIC18.67■□□□□ 0.58
ACTA1P68133 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.67■□□□□ 0.58
ACTA1P68133 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.67■□□□□ 0.58
ACTA1P68133 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTA1P68133 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ACTA1P68133 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.67■□□□□ 0.58
ACTA1P68133 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTA1P68133 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.67■□□□□ 0.58
ACTA1P68133 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.67■□□□□ 0.58
ACTA1P68133 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACTA1P68133 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTA1P68133 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ACTA1P68133 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.66■□□□□ 0.58
ACTA1P68133 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTA1P68133 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.66■□□□□ 0.58
ACTA1P68133 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.66■□□□□ 0.58
ACTA1P68133 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
ACTA1P68133 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACTA1P68133 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTA1P68133 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.66■□□□□ 0.58
ACTA1P68133 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
ACTA1P68133 AC136469.2-201ENST00000623944 1028 ntBASIC18.66■□□□□ 0.58
ACTA1P68133 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.66■□□□□ 0.58
ACTA1P68133 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
ACTA1P68133 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ACTA1P68133 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
ACTA1P68133 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTA1P68133 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACTA1P68133 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTA1P68133 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACTA1P68133 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms