Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.99■□□□□ 0.47
UBA52P62987 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
UBA52P62987 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.99■□□□□ 0.47
UBA52P62987 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBA52P62987 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBA52P62987 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBA52P62987 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBA52P62987 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC17.99■□□□□ 0.47
UBA52P62987 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.99■□□□□ 0.47
UBA52P62987 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBA52P62987 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.99■□□□□ 0.47
UBA52P62987 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBA52P62987 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBA52P62987 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
UBA52P62987 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.99■□□□□ 0.47
UBA52P62987 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.99■□□□□ 0.47
UBA52P62987 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.99■□□□□ 0.47
UBA52P62987 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
UBA52P62987 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.99■□□□□ 0.47
UBA52P62987 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.99■□□□□ 0.47
UBA52P62987 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBA52P62987 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBA52P62987 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBA52P62987 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.98■□□□□ 0.47
UBA52P62987 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.98■□□□□ 0.47
UBA52P62987 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBA52P62987 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.98■□□□□ 0.47
UBA52P62987 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.98■□□□□ 0.47
UBA52P62987 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
UBA52P62987 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBA52P62987 AC027612.3-201ENST00000413684 1047 ntBASIC17.98■□□□□ 0.47
UBA52P62987 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.98■□□□□ 0.47
UBA52P62987 DUX4L2-201ENST00000561772 1275 ntBASIC17.98■□□□□ 0.47
UBA52P62987 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.98■□□□□ 0.47
UBA52P62987 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
UBA52P62987 DUX4L6-201ENST00000626483 1275 ntBASIC17.98■□□□□ 0.47
UBA52P62987 DUX4L1-201ENST00000627662 1275 ntBASIC17.98■□□□□ 0.47
UBA52P62987 DUX4L8-201ENST00000629013 1275 ntBASIC17.98■□□□□ 0.47
UBA52P62987 DUX4L3-201ENST00000630187 1275 ntBASIC17.98■□□□□ 0.47
UBA52P62987 DUX4L7-201ENST00000630678 1275 ntBASIC17.98■□□□□ 0.47
UBA52P62987 DUX4L5-201ENST00000630834 1275 ntBASIC17.98■□□□□ 0.47
UBA52P62987 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.98■□□□□ 0.47
UBA52P62987 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
UBA52P62987 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBA52P62987 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.98■□□□□ 0.47
UBA52P62987 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
UBA52P62987 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBA52P62987 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
UBA52P62987 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.98■□□□□ 0.47
UBA52P62987 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBA52P62987 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.98■□□□□ 0.47
UBA52P62987 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.98■□□□□ 0.47
UBA52P62987 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBA52P62987 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.98■□□□□ 0.47
UBA52P62987 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBA52P62987 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBA52P62987 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
UBA52P62987 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.97■□□□□ 0.47
UBA52P62987 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBA52P62987 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBA52P62987 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
UBA52P62987 AC123595.1-201ENST00000440769 1046 ntBASIC17.97■□□□□ 0.47
UBA52P62987 IGHV3-19-201ENST00000521488 291 ntBASIC17.97■□□□□ 0.47
UBA52P62987 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.97■□□□□ 0.47
UBA52P62987 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBA52P62987 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.97■□□□□ 0.47
UBA52P62987 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.97■□□□□ 0.47
UBA52P62987 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.97■□□□□ 0.47
UBA52P62987 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.97■□□□□ 0.47
UBA52P62987 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBA52P62987 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBA52P62987 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
UBA52P62987 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBA52P62987 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBA52P62987 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
UBA52P62987 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.97■□□□□ 0.47
UBA52P62987 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBA52P62987 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBA52P62987 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.96■□□□□ 0.47
UBA52P62987 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBA52P62987 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBA52P62987 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.96■□□□□ 0.47
UBA52P62987 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.96■□□□□ 0.47
UBA52P62987 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBA52P62987 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
UBA52P62987 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBA52P62987 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.96■□□□□ 0.47
UBA52P62987 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.96■□□□□ 0.47
UBA52P62987 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
UBA52P62987 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBA52P62987 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBA52P62987 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBA52P62987 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBA52P62987 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBA52P62987 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBA52P62987 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.96■□□□□ 0.47
UBA52P62987 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.96■□□□□ 0.47
UBA52P62987 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
UBA52P62987 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
UBA52P62987 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms