Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.83■□□□□ 0.92
CLDN2P57739 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN2P57739 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CLDN2P57739 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN2P57739 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN2P57739 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN2P57739 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.82■□□□□ 0.92
CLDN2P57739 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.82■□□□□ 0.92
CLDN2P57739 KRT18P6-201ENST00000555540 1265 ntBASIC20.82■□□□□ 0.92
CLDN2P57739 AC008694.1-202ENST00000636953 945 ntBASIC20.82■□□□□ 0.92
CLDN2P57739 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.82■□□□□ 0.92
CLDN2P57739 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CLDN2P57739 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN2P57739 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.81■□□□□ 0.92
CLDN2P57739 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CLDN2P57739 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN2P57739 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.81■□□□□ 0.92
CLDN2P57739 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.81■□□□□ 0.92
CLDN2P57739 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN2P57739 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN2P57739 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CLDN2P57739 MIPEPP3-201ENST00000412105 444 ntBASIC20.81■□□□□ 0.92
CLDN2P57739 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN2P57739 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN2P57739 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.81■□□□□ 0.92
CLDN2P57739 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.81■□□□□ 0.92
CLDN2P57739 AC069236.1-201ENST00000604339 616 ntBASIC20.81■□□□□ 0.92
CLDN2P57739 OR10C1-204ENST00000622521 1039 ntBASIC20.81■□□□□ 0.92
CLDN2P57739 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.81■□□□□ 0.92
CLDN2P57739 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.81■□□□□ 0.92
CLDN2P57739 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.81■□□□□ 0.92
CLDN2P57739 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CLDN2P57739 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.81■□□□□ 0.92
CLDN2P57739 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CLDN2P57739 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN2P57739 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN2P57739 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN2P57739 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.8■□□□□ 0.92
CLDN2P57739 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN2P57739 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.8■□□□□ 0.92
CLDN2P57739 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.8■□□□□ 0.92
CLDN2P57739 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.8■□□□□ 0.92
CLDN2P57739 AC133041.1-202ENST00000642053 222 ntBASIC20.8■□□□□ 0.92
CLDN2P57739 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN2P57739 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.8■□□□□ 0.92
CLDN2P57739 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN2P57739 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN2P57739 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN2P57739 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN2P57739 C11orf96-202ENST00000528572 1834 ntBASIC20.79■□□□□ 0.92
CLDN2P57739 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CLDN2P57739 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.79■□□□□ 0.92
CLDN2P57739 TSPY20P-201ENST00000450910 630 ntBASIC20.79■□□□□ 0.92
CLDN2P57739 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN2P57739 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.79■□□□□ 0.92
CLDN2P57739 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN2P57739 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN2P57739 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.78■□□□□ 0.92
CLDN2P57739 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.78■□□□□ 0.92
CLDN2P57739 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN2P57739 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN2P57739 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN2P57739 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN2P57739 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN2P57739 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
CLDN2P57739 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
CLDN2P57739 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN2P57739 AL591742.1-201ENST00000604433 565 ntBASIC20.78■□□□□ 0.92
CLDN2P57739 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN2P57739 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN2P57739 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN2P57739 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.78■□□□□ 0.92
CLDN2P57739 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN2P57739 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN2P57739 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN2P57739 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN2P57739 MIR4758-201ENST00000577688 71 ntBASIC20.77■□□□□ 0.92
CLDN2P57739 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN2P57739 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN2P57739 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN2P57739 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN2P57739 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLDN2P57739 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.77■□□□□ 0.91
CLDN2P57739 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
CLDN2P57739 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN2P57739 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN2P57739 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN2P57739 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CLDN2P57739 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN2P57739 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN2P57739 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN2P57739 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CLDN2P57739 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.76■□□□□ 0.91
CLDN2P57739 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.76■□□□□ 0.91
CLDN2P57739 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.76■□□□□ 0.91
CLDN2P57739 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.76■□□□□ 0.91
CLDN2P57739 AC243732.1-201ENST00000612648 864 ntBASIC20.76■□□□□ 0.91
CLDN2P57739 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN2P57739 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN2P57739 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms