Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAV3P56539 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CAV3P56539 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.67■□□□□ 0.58
CAV3P56539 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CAV3P56539 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CAV3P56539 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAV3P56539 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CAV3P56539 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CAV3P56539 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.66■□□□□ 0.58
CAV3P56539 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
CAV3P56539 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CAV3P56539 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CAV3P56539 AL049796.1-201ENST00000565336 1766 ntBASIC18.66■□□□□ 0.58
CAV3P56539 C17orf82-201ENST00000623772 1530 ntBASIC18.66■□□□□ 0.58
CAV3P56539 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAV3P56539 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.66■□□□□ 0.58
CAV3P56539 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.66■□□□□ 0.58
CAV3P56539 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.66■□□□□ 0.58
CAV3P56539 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CAV3P56539 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.66■□□□□ 0.58
CAV3P56539 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.66■□□□□ 0.58
CAV3P56539 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAV3P56539 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAV3P56539 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAV3P56539 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAV3P56539 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
CAV3P56539 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAV3P56539 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.66■□□□□ 0.58
CAV3P56539 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CAV3P56539 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.66■□□□□ 0.58
CAV3P56539 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CAV3P56539 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CAV3P56539 OXCT2P1-201ENST00000447263 1535 ntBASIC18.65■□□□□ 0.58
CAV3P56539 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CAV3P56539 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CAV3P56539 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAV3P56539 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAV3P56539 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAV3P56539 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAV3P56539 AC131281.2-201ENST00000520478 145 ntBASIC18.65■□□□□ 0.58
CAV3P56539 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.65■□□□□ 0.58
CAV3P56539 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.65■□□□□ 0.58
CAV3P56539 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CAV3P56539 AC073314.1-201ENST00000568729 2216 ntBASIC18.65■□□□□ 0.58
CAV3P56539 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAV3P56539 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CAV3P56539 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CAV3P56539 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAV3P56539 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAV3P56539 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CAV3P56539 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAV3P56539 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.64■□□□□ 0.57
CAV3P56539 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CAV3P56539 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.64■□□□□ 0.57
CAV3P56539 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAV3P56539 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAV3P56539 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAV3P56539 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.64■□□□□ 0.57
CAV3P56539 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.64■□□□□ 0.57
CAV3P56539 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.64■□□□□ 0.57
CAV3P56539 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CAV3P56539 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.64■□□□□ 0.57
CAV3P56539 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.64■□□□□ 0.57
CAV3P56539 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAV3P56539 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.63■□□□□ 0.57
CAV3P56539 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.63■□□□□ 0.57
CAV3P56539 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CAV3P56539 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.63■□□□□ 0.57
CAV3P56539 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CAV3P56539 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CAV3P56539 SRD5A1P1-201ENST00000442297 786 ntBASIC18.63■□□□□ 0.57
CAV3P56539 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CAV3P56539 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CAV3P56539 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.62■□□□□ 0.57
CAV3P56539 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CAV3P56539 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.62■□□□□ 0.57
CAV3P56539 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.62■□□□□ 0.57
CAV3P56539 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAV3P56539 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CAV3P56539 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAV3P56539 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.62■□□□□ 0.57
CAV3P56539 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.62■□□□□ 0.57
CAV3P56539 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.62■□□□□ 0.57
CAV3P56539 AC241377.3-202ENST00000626088 1088 ntBASIC18.62■□□□□ 0.57
CAV3P56539 AC241585.3-202ENST00000628937 1088 ntBASIC18.62■□□□□ 0.57
CAV3P56539 AC245100.8-202ENST00000629247 1058 ntBASIC18.62■□□□□ 0.57
CAV3P56539 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAV3P56539 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAV3P56539 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CAV3P56539 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAV3P56539 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAV3P56539 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CAV3P56539 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CAV3P56539 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.62■□□□□ 0.57
CAV3P56539 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CAV3P56539 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CAV3P56539 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAV3P56539 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CAV3P56539 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CAV3P56539 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms