Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH6P55285 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.86■■□□□ 1.09
CDH6P55285 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.86■■□□□ 1.09
CDH6P55285 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH6P55285 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH6P55285 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDH6P55285 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH6P55285 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH6P55285 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CDH6P55285 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH6P55285 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
CDH6P55285 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.85■■□□□ 1.09
CDH6P55285 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH6P55285 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.85■■□□□ 1.09
CDH6P55285 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH6P55285 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.85■■□□□ 1.09
CDH6P55285 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.85■■□□□ 1.09
CDH6P55285 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CDH6P55285 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH6P55285 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH6P55285 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH6P55285 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH6P55285 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CDH6P55285 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CDH6P55285 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.84■■□□□ 1.09
CDH6P55285 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDH6P55285 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.84■■□□□ 1.09
CDH6P55285 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CDH6P55285 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDH6P55285 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDH6P55285 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CDH6P55285 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.84■■□□□ 1.09
CDH6P55285 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.84■■□□□ 1.09
CDH6P55285 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CDH6P55285 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
CDH6P55285 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDH6P55285 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDH6P55285 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDH6P55285 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.83■■□□□ 1.09
CDH6P55285 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CDH6P55285 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDH6P55285 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CDH6P55285 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.83■■□□□ 1.09
CDH6P55285 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CDH6P55285 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.83■■□□□ 1.09
CDH6P55285 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDH6P55285 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDH6P55285 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDH6P55285 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CDH6P55285 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH6P55285 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.82■■□□□ 1.08
CDH6P55285 AL049796.1-201ENST00000565336 1766 ntBASIC21.82■■□□□ 1.08
CDH6P55285 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH6P55285 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDH6P55285 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.82■■□□□ 1.08
CDH6P55285 AC079140.4-201ENST00000507448 529 ntBASIC21.82■■□□□ 1.08
CDH6P55285 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.82■■□□□ 1.08
CDH6P55285 EEF1DP3-203ENST00000566025 782 ntBASIC21.82■■□□□ 1.08
CDH6P55285 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.82■■□□□ 1.08
CDH6P55285 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDH6P55285 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
CDH6P55285 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDH6P55285 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
CDH6P55285 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CDH6P55285 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH6P55285 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH6P55285 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CDH6P55285 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH6P55285 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDH6P55285 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH6P55285 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CDH6P55285 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH6P55285 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDH6P55285 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDH6P55285 AC053503.5-201ENST00000601508 636 ntBASIC21.81■■□□□ 1.08
CDH6P55285 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH6P55285 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
CDH6P55285 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.81■■□□□ 1.08
CDH6P55285 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH6P55285 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CDH6P55285 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CDH6P55285 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CDH6P55285 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH6P55285 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.8■■□□□ 1.08
CDH6P55285 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CDH6P55285 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CDH6P55285 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.8■■□□□ 1.08
CDH6P55285 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.8■■□□□ 1.08
CDH6P55285 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.8■■□□□ 1.08
CDH6P55285 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CDH6P55285 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.8■■□□□ 1.08
CDH6P55285 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.8■■□□□ 1.08
CDH6P55285 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CDH6P55285 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDH6P55285 LINC02228-203ENST00000641970 1355 ntBASIC21.79■■□□□ 1.08
CDH6P55285 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDH6P55285 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH6P55285 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH6P55285 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH6P55285 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms