Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NR1H2P55055 AL355001.2-201ENST00000620617 1191 ntBASIC19.8■□□□□ 0.76
NR1H2P55055 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NR1H2P55055 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NR1H2P55055 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.8■□□□□ 0.76
NR1H2P55055 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NR1H2P55055 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NR1H2P55055 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NR1H2P55055 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NR1H2P55055 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NR1H2P55055 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NR1H2P55055 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NR1H2P55055 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NR1H2P55055 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NR1H2P55055 AFG3L1P-217ENST00000557444 2447 ntBASIC19.79■□□□□ 0.76
NR1H2P55055 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NR1H2P55055 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
NR1H2P55055 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.79■□□□□ 0.76
NR1H2P55055 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NR1H2P55055 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NR1H2P55055 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NR1H2P55055 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NR1H2P55055 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NR1H2P55055 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
NR1H2P55055 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR1H2P55055 SYT6-210ENST00000641643 1587 ntBASIC19.78■□□□□ 0.76
NR1H2P55055 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR1H2P55055 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR1H2P55055 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR1H2P55055 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR1H2P55055 GABARAPL3-202ENST00000624044 1851 ntBASIC19.78■□□□□ 0.76
NR1H2P55055 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NR1H2P55055 AC024257.2-201ENST00000549699 147 ntBASIC19.78■□□□□ 0.76
NR1H2P55055 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.78■□□□□ 0.76
NR1H2P55055 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR1H2P55055 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.78■□□□□ 0.76
NR1H2P55055 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR1H2P55055 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
NR1H2P55055 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NR1H2P55055 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NR1H2P55055 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.77■□□□□ 0.76
NR1H2P55055 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NR1H2P55055 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
NR1H2P55055 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
NR1H2P55055 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
NR1H2P55055 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NR1H2P55055 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NR1H2P55055 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NR1H2P55055 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NR1H2P55055 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.77■□□□□ 0.76
NR1H2P55055 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NR1H2P55055 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NR1H2P55055 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
NR1H2P55055 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.77■□□□□ 0.76
NR1H2P55055 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NR1H2P55055 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.77■□□□□ 0.76
NR1H2P55055 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.77■□□□□ 0.76
NR1H2P55055 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NR1H2P55055 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NR1H2P55055 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
NR1H2P55055 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NR1H2P55055 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NR1H2P55055 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.77■□□□□ 0.75
NR1H2P55055 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
NR1H2P55055 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR1H2P55055 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NR1H2P55055 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NR1H2P55055 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NR1H2P55055 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NR1H2P55055 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.76■□□□□ 0.75
NR1H2P55055 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.76■□□□□ 0.75
NR1H2P55055 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR1H2P55055 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR1H2P55055 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NR1H2P55055 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.76■□□□□ 0.75
NR1H2P55055 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NR1H2P55055 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR1H2P55055 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NR1H2P55055 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NR1H2P55055 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NR1H2P55055 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR1H2P55055 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR1H2P55055 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.75■□□□□ 0.75
NR1H2P55055 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
NR1H2P55055 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
NR1H2P55055 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR1H2P55055 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NR1H2P55055 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR1H2P55055 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR1H2P55055 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR1H2P55055 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.75■□□□□ 0.75
NR1H2P55055 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR1H2P55055 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
NR1H2P55055 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR1H2P55055 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR1H2P55055 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NR1H2P55055 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NR1H2P55055 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NR1H2P55055 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NR1H2P55055 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms