Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.62■□□□□ 0.73
SMSP52788 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMSP52788 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMSP52788 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMSP52788 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.62■□□□□ 0.73
SMSP52788 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.62■□□□□ 0.73
SMSP52788 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SMSP52788 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.62■□□□□ 0.73
SMSP52788 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.62■□□□□ 0.73
SMSP52788 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.62■□□□□ 0.73
SMSP52788 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMSP52788 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SMSP52788 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.62■□□□□ 0.73
SMSP52788 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.62■□□□□ 0.73
SMSP52788 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMSP52788 Z98882.1-201ENST00000622160 2253 ntBASIC19.62■□□□□ 0.73
SMSP52788 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SMSP52788 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMSP52788 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMSP52788 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMSP52788 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMSP52788 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMSP52788 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMSP52788 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.61■□□□□ 0.73
SMSP52788 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.61■□□□□ 0.73
SMSP52788 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMSP52788 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.61■□□□□ 0.73
SMSP52788 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMSP52788 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMSP52788 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMSP52788 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.6■□□□□ 0.73
SMSP52788 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.6■□□□□ 0.73
SMSP52788 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMSP52788 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMSP52788 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMSP52788 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.6■□□□□ 0.73
SMSP52788 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMSP52788 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SMSP52788 AC006015.1-201ENST00000429970 570 ntBASIC19.6■□□□□ 0.73
SMSP52788 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.6■□□□□ 0.73
SMSP52788 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
SMSP52788 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMSP52788 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.6■□□□□ 0.73
SMSP52788 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMSP52788 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.59■□□□□ 0.73
SMSP52788 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.59■□□□□ 0.73
SMSP52788 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SMSP52788 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMSP52788 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMSP52788 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMSP52788 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SMSP52788 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
SMSP52788 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMSP52788 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMSP52788 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.59■□□□□ 0.73
SMSP52788 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
SMSP52788 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.59■□□□□ 0.73
SMSP52788 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
SMSP52788 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMSP52788 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.59■□□□□ 0.73
SMSP52788 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMSP52788 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.59■□□□□ 0.73
SMSP52788 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
SMSP52788 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.59■□□□□ 0.73
SMSP52788 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SMSP52788 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SMSP52788 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMSP52788 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SMSP52788 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.58■□□□□ 0.72
SMSP52788 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMSP52788 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.58■□□□□ 0.72
SMSP52788 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.58■□□□□ 0.72
SMSP52788 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.58■□□□□ 0.72
SMSP52788 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC19.58■□□□□ 0.72
SMSP52788 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.58■□□□□ 0.72
SMSP52788 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.58■□□□□ 0.72
SMSP52788 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMSP52788 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMSP52788 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SMSP52788 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMSP52788 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SMSP52788 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMSP52788 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMSP52788 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SMSP52788 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.57■□□□□ 0.72
SMSP52788 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.57■□□□□ 0.72
SMSP52788 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMSP52788 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.57■□□□□ 0.72
SMSP52788 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMSP52788 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMSP52788 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMSP52788 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMSP52788 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.57■□□□□ 0.72
SMSP52788 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.57■□□□□ 0.72
SMSP52788 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.57■□□□□ 0.72
SMSP52788 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMSP52788 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMSP52788 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SMSP52788 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SMSP52788 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms