Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB5CP51148 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5CP51148 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.9■□□□□ 0.3
RAB5CP51148 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5CP51148 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
RAB5CP51148 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5CP51148 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5CP51148 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5CP51148 IDNK-203ENST00000405990 629 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB5CP51148 MACF1-219ENST00000484793 834 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB5CP51148 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5CP51148 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RAB5CP51148 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RAB5CP51148 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC16.9■□□□□ 0.3
RAB5CP51148 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5CP51148 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5CP51148 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RAB5CP51148 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
RAB5CP51148 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
RAB5CP51148 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5CP51148 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5CP51148 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5CP51148 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB5CP51148 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.9■□□□□ 0.3
RAB5CP51148 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5CP51148 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB5CP51148 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB5CP51148 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.89■□□□□ 0.3
RAB5CP51148 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5CP51148 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5CP51148 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5CP51148 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5CP51148 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5CP51148 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5CP51148 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5CP51148 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC16.89■□□□□ 0.29
RAB5CP51148 AC022413.1-201ENST00000624602 984 ntBASIC16.89■□□□□ 0.29
RAB5CP51148 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5CP51148 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5CP51148 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5CP51148 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RAB5CP51148 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5CP51148 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5CP51148 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.89■□□□□ 0.29
RAB5CP51148 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5CP51148 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5CP51148 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5CP51148 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5CP51148 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.89■□□□□ 0.29
RAB5CP51148 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RAB5CP51148 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB5CP51148 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB5CP51148 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB5CP51148 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RAB5CP51148 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB5CP51148 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RAB5CP51148 LONRF2P2-201ENST00000439212 571 ntBASIC16.88■□□□□ 0.29
RAB5CP51148 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB5CP51148 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB5CP51148 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB5CP51148 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB5CP51148 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
RAB5CP51148 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.88■□□□□ 0.29
RAB5CP51148 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RAB5CP51148 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RAB5CP51148 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RAB5CP51148 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB5CP51148 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB5CP51148 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB5CP51148 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB5CP51148 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
RAB5CP51148 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.87■□□□□ 0.29
RAB5CP51148 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB5CP51148 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.87■□□□□ 0.29
RAB5CP51148 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB5CP51148 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB5CP51148 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB5CP51148 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB5CP51148 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.87■□□□□ 0.29
RAB5CP51148 DUX4L4-201ENST00000566884 1269 ntBASIC16.87■□□□□ 0.29
RAB5CP51148 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB5CP51148 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RAB5CP51148 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RAB5CP51148 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
RAB5CP51148 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5CP51148 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5CP51148 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5CP51148 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5CP51148 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RAB5CP51148 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5CP51148 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5CP51148 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RAB5CP51148 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5CP51148 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB5CP51148 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5CP51148 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RAB5CP51148 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.86■□□□□ 0.29
RAB5CP51148 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB5CP51148 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.86■□□□□ 0.29
RAB5CP51148 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms