Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.97■□□□□ 0.63
CENPAP49450 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CENPAP49450 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CENPAP49450 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.97■□□□□ 0.63
CENPAP49450 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.97■□□□□ 0.63
CENPAP49450 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CENPAP49450 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CENPAP49450 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CENPAP49450 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CENPAP49450 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CENPAP49450 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CENPAP49450 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CENPAP49450 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.96■□□□□ 0.63
CENPAP49450 SNX3-202ENST00000349379 890 ntTSL 2 BASIC18.96■□□□□ 0.63
CENPAP49450 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CENPAP49450 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CENPAP49450 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.96■□□□□ 0.63
CENPAP49450 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CENPAP49450 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CENPAP49450 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.96■□□□□ 0.63
CENPAP49450 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CENPAP49450 SLC25A24-204ENST00000569674 2357 ntBASIC18.96■□□□□ 0.63
CENPAP49450 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CENPAP49450 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CENPAP49450 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CENPAP49450 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CENPAP49450 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CENPAP49450 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CENPAP49450 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CENPAP49450 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CENPAP49450 BX842568.3-201ENST00000418104 571 ntBASIC18.95■□□□□ 0.62
CENPAP49450 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CENPAP49450 AC008764.7-201ENST00000593779 1081 ntBASIC18.95■□□□□ 0.62
CENPAP49450 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CENPAP49450 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CENPAP49450 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CENPAP49450 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CENPAP49450 AC135279.3-201ENST00000610945 1311 ntBASIC18.95■□□□□ 0.62
CENPAP49450 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CENPAP49450 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CENPAP49450 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.95■□□□□ 0.62
CENPAP49450 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CENPAP49450 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CENPAP49450 AF106564.1-201ENST00000607058 2553 ntBASIC18.94■□□□□ 0.62
CENPAP49450 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.94■□□□□ 0.62
CENPAP49450 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CENPAP49450 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CENPAP49450 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.94■□□□□ 0.62
CENPAP49450 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CENPAP49450 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CENPAP49450 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CENPAP49450 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CENPAP49450 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CENPAP49450 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CENPAP49450 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CENPAP49450 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.94■□□□□ 0.62
CENPAP49450 AC233992.3-201ENST00000607491 485 ntBASIC18.94■□□□□ 0.62
CENPAP49450 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CENPAP49450 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.94■□□□□ 0.62
CENPAP49450 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.94■□□□□ 0.62
CENPAP49450 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CENPAP49450 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.94■□□□□ 0.62
CENPAP49450 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CENPAP49450 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CENPAP49450 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CENPAP49450 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CENPAP49450 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CENPAP49450 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CENPAP49450 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CENPAP49450 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CENPAP49450 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CENPAP49450 AC096631.2-201ENST00000436136 790 ntBASIC18.93■□□□□ 0.62
CENPAP49450 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.93■□□□□ 0.62
CENPAP49450 PBX2P1-201ENST00000493219 1291 ntBASIC18.93■□□□□ 0.62
CENPAP49450 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.93■□□□□ 0.62
CENPAP49450 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.93■□□□□ 0.62
CENPAP49450 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CENPAP49450 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CENPAP49450 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
CENPAP49450 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.93■□□□□ 0.62
CENPAP49450 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CENPAP49450 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CENPAP49450 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CENPAP49450 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CENPAP49450 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CENPAP49450 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CENPAP49450 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CENPAP49450 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.92■□□□□ 0.62
CENPAP49450 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CENPAP49450 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CENPAP49450 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CENPAP49450 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CENPAP49450 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.92■□□□□ 0.62
CENPAP49450 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CENPAP49450 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CENPAP49450 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.91■□□□□ 0.62
CENPAP49450 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CENPAP49450 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.91■□□□□ 0.62
CENPAP49450 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.91■□□□□ 0.62
CENPAP49450 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms