Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
GABRA4P48169 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
GABRA4P48169 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.03■□□□□ 0.8
GABRA4P48169 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.03■□□□□ 0.8
GABRA4P48169 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
GABRA4P48169 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
GABRA4P48169 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GABRA4P48169 AC068338.2-201ENST00000563278 1430 ntBASIC20.02■□□□□ 0.8
GABRA4P48169 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GABRA4P48169 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GABRA4P48169 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.02■□□□□ 0.8
GABRA4P48169 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
GABRA4P48169 AC104771.1-201ENST00000603335 964 ntBASIC20.02■□□□□ 0.8
GABRA4P48169 AC243732.1-201ENST00000612648 864 ntBASIC20.02■□□□□ 0.8
GABRA4P48169 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
GABRA4P48169 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
GABRA4P48169 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
GABRA4P48169 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
GABRA4P48169 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
GABRA4P48169 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GABRA4P48169 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GABRA4P48169 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GABRA4P48169 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GABRA4P48169 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.01■□□□□ 0.79
GABRA4P48169 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.01■□□□□ 0.79
GABRA4P48169 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GABRA4P48169 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
GABRA4P48169 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
GABRA4P48169 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
GABRA4P48169 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.01■□□□□ 0.79
GABRA4P48169 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.01■□□□□ 0.79
GABRA4P48169 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
GABRA4P48169 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GABRA4P48169 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GABRA4P48169 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20■□□□□ 0.79
GABRA4P48169 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20■□□□□ 0.79
GABRA4P48169 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20■□□□□ 0.79
GABRA4P48169 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
GABRA4P48169 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
GABRA4P48169 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
GABRA4P48169 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20■□□□□ 0.79
GABRA4P48169 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20■□□□□ 0.79
GABRA4P48169 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
GABRA4P48169 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20■□□□□ 0.79
GABRA4P48169 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20■□□□□ 0.79
GABRA4P48169 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20■□□□□ 0.79
GABRA4P48169 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
GABRA4P48169 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
GABRA4P48169 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20■□□□□ 0.79
GABRA4P48169 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
GABRA4P48169 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GABRA4P48169 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
GABRA4P48169 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GABRA4P48169 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.99■□□□□ 0.79
GABRA4P48169 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.99■□□□□ 0.79
GABRA4P48169 METTL15-202ENST00000403099 795 ntTSL 5 BASIC19.99■□□□□ 0.79
GABRA4P48169 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GABRA4P48169 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.99■□□□□ 0.79
GABRA4P48169 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GABRA4P48169 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.99■□□□□ 0.79
GABRA4P48169 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
GABRA4P48169 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
GABRA4P48169 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
GABRA4P48169 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GABRA4P48169 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.98■□□□□ 0.79
GABRA4P48169 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GABRA4P48169 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GABRA4P48169 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.98■□□□□ 0.79
GABRA4P48169 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.98■□□□□ 0.79
GABRA4P48169 GPX1P1-201ENST00000388829 606 ntBASIC19.98■□□□□ 0.79
GABRA4P48169 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
GABRA4P48169 GUSBP6-202ENST00000438529 1198 ntBASIC19.98■□□□□ 0.79
GABRA4P48169 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
GABRA4P48169 AL121832.2-201ENST00000610979 668 ntBASIC19.98■□□□□ 0.79
GABRA4P48169 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
GABRA4P48169 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.98■□□□□ 0.79
GABRA4P48169 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.98■□□□□ 0.79
GABRA4P48169 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
GABRA4P48169 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
GABRA4P48169 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
GABRA4P48169 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
GABRA4P48169 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GABRA4P48169 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
GABRA4P48169 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.97■□□□□ 0.79
GABRA4P48169 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
GABRA4P48169 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
GABRA4P48169 AC083906.2-201ENST00000511578 360 ntBASIC19.97■□□□□ 0.79
GABRA4P48169 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.97■□□□□ 0.79
GABRA4P48169 AC133552.2-202ENST00000575694 574 ntBASIC19.97■□□□□ 0.79
GABRA4P48169 AL109923.1-201ENST00000618799 583 ntBASIC19.97■□□□□ 0.79
GABRA4P48169 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.97■□□□□ 0.79
GABRA4P48169 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.97■□□□□ 0.79
GABRA4P48169 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
GABRA4P48169 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.97■□□□□ 0.79
GABRA4P48169 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
GABRA4P48169 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GABRA4P48169 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.96■□□□□ 0.79
GABRA4P48169 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
GABRA4P48169 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.96■□□□□ 0.79
GABRA4P48169 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms