Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CBX5P45973 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.01■□□□□ 0.47
CBX5P45973 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CBX5P45973 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.01■□□□□ 0.47
CBX5P45973 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CBX5P45973 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.01■□□□□ 0.47
CBX5P45973 AC241377.3-202ENST00000626088 1088 ntBASIC18.01■□□□□ 0.47
CBX5P45973 AC241585.3-202ENST00000628937 1088 ntBASIC18.01■□□□□ 0.47
CBX5P45973 AC245100.8-202ENST00000629247 1058 ntBASIC18.01■□□□□ 0.47
CBX5P45973 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.01■□□□□ 0.47
CBX5P45973 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CBX5P45973 AC026471.6-201ENST00000622954 1905 ntBASIC18.01■□□□□ 0.47
CBX5P45973 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CBX5P45973 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CBX5P45973 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.01■□□□□ 0.47
CBX5P45973 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CBX5P45973 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CBX5P45973 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CBX5P45973 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18■□□□□ 0.47
CBX5P45973 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18■□□□□ 0.47
CBX5P45973 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CBX5P45973 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
CBX5P45973 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CBX5P45973 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
CBX5P45973 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CBX5P45973 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CBX5P45973 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18■□□□□ 0.47
CBX5P45973 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CBX5P45973 CD72-202ENST00000378430 585 ntTSL 3 BASIC18■□□□□ 0.47
CBX5P45973 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18■□□□□ 0.47
CBX5P45973 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18■□□□□ 0.47
CBX5P45973 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18■□□□□ 0.47
CBX5P45973 AL157384.1-201ENST00000445995 2473 ntBASIC18■□□□□ 0.47
CBX5P45973 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CBX5P45973 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CBX5P45973 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CBX5P45973 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18■□□□□ 0.47
CBX5P45973 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CBX5P45973 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CBX5P45973 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18■□□□□ 0.47
CBX5P45973 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CBX5P45973 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CBX5P45973 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CBX5P45973 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CBX5P45973 LETM1P2-201ENST00000597330 2178 ntBASIC17.99■□□□□ 0.47
CBX5P45973 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CBX5P45973 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CBX5P45973 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.99■□□□□ 0.47
CBX5P45973 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CBX5P45973 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.99■□□□□ 0.47
CBX5P45973 KRT125P-201ENST00000546827 989 ntBASIC17.99■□□□□ 0.47
CBX5P45973 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.99■□□□□ 0.47
CBX5P45973 EXOG-217ENST00000630638 197 ntTSL 5 BASIC17.99■□□□□ 0.47
CBX5P45973 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.99■□□□□ 0.47
CBX5P45973 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CBX5P45973 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
CBX5P45973 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CBX5P45973 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CBX5P45973 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CBX5P45973 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.98■□□□□ 0.47
CBX5P45973 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CBX5P45973 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CBX5P45973 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CBX5P45973 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CBX5P45973 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CBX5P45973 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CBX5P45973 AC087239.1-201ENST00000622671 572 ntBASIC17.98■□□□□ 0.47
CBX5P45973 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CBX5P45973 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.98■□□□□ 0.47
CBX5P45973 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CBX5P45973 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CBX5P45973 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.98■□□□□ 0.47
CBX5P45973 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CBX5P45973 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CBX5P45973 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX5P45973 AL049796.1-201ENST00000565336 1766 ntBASIC17.97■□□□□ 0.47
CBX5P45973 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX5P45973 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.97■□□□□ 0.47
CBX5P45973 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.97■□□□□ 0.47
CBX5P45973 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.97■□□□□ 0.47
CBX5P45973 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.97■□□□□ 0.47
CBX5P45973 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX5P45973 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX5P45973 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX5P45973 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX5P45973 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
CBX5P45973 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX5P45973 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC17.97■□□□□ 0.47
CBX5P45973 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX5P45973 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CBX5P45973 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.96■□□□□ 0.47
CBX5P45973 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX5P45973 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX5P45973 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX5P45973 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CBX5P45973 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.96■□□□□ 0.47
CBX5P45973 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
CBX5P45973 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.96■□□□□ 0.47
CBX5P45973 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CBX5P45973 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms