Protein–RNA interactions for Protein: P26441

CNTF, Ciliary neurotrophic factor, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFP26441 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTFP26441 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.97■□□□□ 0.95
CNTFP26441 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CNTFP26441 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTFP26441 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTFP26441 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTFP26441 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
CNTFP26441 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNTFP26441 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CNTFP26441 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTFP26441 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTFP26441 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CNTFP26441 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CNTFP26441 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNTFP26441 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNTFP26441 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CNTFP26441 AP005212.1-201ENST00000581547 1997 ntBASIC20.96■□□□□ 0.95
CNTFP26441 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNTFP26441 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.96■□□□□ 0.95
CNTFP26441 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.96■□□□□ 0.95
CNTFP26441 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CNTFP26441 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.96■□□□□ 0.95
CNTFP26441 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.96■□□□□ 0.95
CNTFP26441 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.96■□□□□ 0.95
CNTFP26441 AC133561.4-201ENST00000566112 224 ntBASIC20.96■□□□□ 0.95
CNTFP26441 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNTFP26441 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNTFP26441 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CNTFP26441 PLK5-205ENST00000642079 1969 ntBASIC20.96■□□□□ 0.95
CNTFP26441 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTFP26441 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.95■□□□□ 0.94
CNTFP26441 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTFP26441 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTFP26441 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTFP26441 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTFP26441 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
CNTFP26441 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.95■□□□□ 0.94
CNTFP26441 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CNTFP26441 BX842568.3-201ENST00000418104 571 ntBASIC20.95■□□□□ 0.94
CNTFP26441 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNTFP26441 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.95■□□□□ 0.94
CNTFP26441 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CNTFP26441 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNTFP26441 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CNTFP26441 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTFP26441 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CNTFP26441 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTFP26441 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CNTFP26441 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CNTFP26441 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
CNTFP26441 AC009237.3-201ENST00000393279 1427 ntBASIC20.95■□□□□ 0.94
CNTFP26441 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNTFP26441 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTFP26441 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CNTFP26441 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNTFP26441 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNTFP26441 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.94■□□□□ 0.94
CNTFP26441 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTFP26441 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTFP26441 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.94■□□□□ 0.94
CNTFP26441 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.94■□□□□ 0.94
CNTFP26441 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CNTFP26441 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CNTFP26441 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.94■□□□□ 0.94
CNTFP26441 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNTFP26441 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CNTFP26441 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.94■□□□□ 0.94
CNTFP26441 AC131212.1-201ENST00000613771 668 ntBASIC20.94■□□□□ 0.94
CNTFP26441 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
CNTFP26441 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
CNTFP26441 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CNTFP26441 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CNTFP26441 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CNTFP26441 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CNTFP26441 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTFP26441 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.93■□□□□ 0.94
CNTFP26441 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.93■□□□□ 0.94
CNTFP26441 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTFP26441 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CNTFP26441 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.93■□□□□ 0.94
CNTFP26441 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.93■□□□□ 0.94
CNTFP26441 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNTFP26441 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.93■□□□□ 0.94
CNTFP26441 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTFP26441 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CNTFP26441 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTFP26441 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CNTFP26441 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTFP26441 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTFP26441 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CNTFP26441 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTFP26441 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.92■□□□□ 0.94
CNTFP26441 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTFP26441 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.92■□□□□ 0.94
CNTFP26441 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.92■□□□□ 0.94
CNTFP26441 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.92■□□□□ 0.94
CNTFP26441 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CNTFP26441 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CNTFP26441 AC121338.2-201ENST00000622535 1744 ntBASIC20.92■□□□□ 0.94
CNTFP26441 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms