Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BMP4P12644 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BMP4P12644 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.17■□□□□ 0.66
BMP4P12644 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BMP4P12644 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BMP4P12644 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BMP4P12644 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
BMP4P12644 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.17■□□□□ 0.66
BMP4P12644 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
BMP4P12644 BX842568.3-201ENST00000418104 571 ntBASIC19.17■□□□□ 0.66
BMP4P12644 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
BMP4P12644 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.17■□□□□ 0.66
BMP4P12644 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.17■□□□□ 0.66
BMP4P12644 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.17■□□□□ 0.66
BMP4P12644 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BMP4P12644 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BMP4P12644 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
BMP4P12644 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.17■□□□□ 0.66
BMP4P12644 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
BMP4P12644 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
BMP4P12644 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
BMP4P12644 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
BMP4P12644 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BMP4P12644 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BMP4P12644 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BMP4P12644 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
BMP4P12644 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
BMP4P12644 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BMP4P12644 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BMP4P12644 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.16■□□□□ 0.66
BMP4P12644 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
BMP4P12644 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
BMP4P12644 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.16■□□□□ 0.66
BMP4P12644 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BMP4P12644 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BMP4P12644 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
BMP4P12644 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.16■□□□□ 0.66
BMP4P12644 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
BMP4P12644 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
BMP4P12644 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
BMP4P12644 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
BMP4P12644 AC099791.1-201ENST00000416440 715 ntBASIC19.15■□□□□ 0.66
BMP4P12644 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.15■□□□□ 0.66
BMP4P12644 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.15■□□□□ 0.66
BMP4P12644 RARRES2P6-201ENST00000567333 442 ntBASIC19.15■□□□□ 0.66
BMP4P12644 pRNA.6-201ENST00000610482 90 ntBASIC19.15■□□□□ 0.66
BMP4P12644 pRNA.5-201ENST00000612139 90 ntBASIC19.15■□□□□ 0.66
BMP4P12644 pRNA.11-201ENST00000618423 90 ntBASIC19.15■□□□□ 0.66
BMP4P12644 pRNA.13-201ENST00000619112 90 ntBASIC19.15■□□□□ 0.66
BMP4P12644 AFG3L1P-217ENST00000557444 2447 ntBASIC19.15■□□□□ 0.66
BMP4P12644 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
BMP4P12644 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
BMP4P12644 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BMP4P12644 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
BMP4P12644 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
BMP4P12644 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
BMP4P12644 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
BMP4P12644 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
BMP4P12644 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.14■□□□□ 0.65
BMP4P12644 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BMP4P12644 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BMP4P12644 MIR5787-201ENST00000611784 55 ntBASIC19.14■□□□□ 0.65
BMP4P12644 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BMP4P12644 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
BMP4P12644 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BMP4P12644 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
BMP4P12644 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.14■□□□□ 0.65
BMP4P12644 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.14■□□□□ 0.65
BMP4P12644 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
BMP4P12644 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
BMP4P12644 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
BMP4P12644 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BMP4P12644 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BMP4P12644 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
BMP4P12644 IRS3P-201ENST00000223076 1006 ntBASIC19.13■□□□□ 0.65
BMP4P12644 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
BMP4P12644 AC006455.2-201ENST00000429931 906 ntBASIC19.13■□□□□ 0.65
BMP4P12644 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.13■□□□□ 0.65
BMP4P12644 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.13■□□□□ 0.65
BMP4P12644 FP325331.1-202ENST00000623531 1380 ntBASIC19.13■□□□□ 0.65
BMP4P12644 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
BMP4P12644 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.13■□□□□ 0.65
BMP4P12644 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
BMP4P12644 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
BMP4P12644 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BMP4P12644 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
BMP4P12644 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BMP4P12644 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BMP4P12644 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
BMP4P12644 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BMP4P12644 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
BMP4P12644 AC144652.1-201ENST00000609974 1624 ntBASIC19.12■□□□□ 0.65
BMP4P12644 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
BMP4P12644 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.12■□□□□ 0.65
BMP4P12644 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BMP4P12644 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
BMP4P12644 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.12■□□□□ 0.65
BMP4P12644 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.12■□□□□ 0.65
BMP4P12644 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
BMP4P12644 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms