Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.23■□□□□ 0.83
LINGO3P0C6S8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINGO3P0C6S8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINGO3P0C6S8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINGO3P0C6S8 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LINGO3P0C6S8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.23■□□□□ 0.83
LINGO3P0C6S8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LINGO3P0C6S8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINGO3P0C6S8 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
LINGO3P0C6S8 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
LINGO3P0C6S8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINGO3P0C6S8 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINGO3P0C6S8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINGO3P0C6S8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINGO3P0C6S8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINGO3P0C6S8 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LINGO3P0C6S8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.22■□□□□ 0.83
LINGO3P0C6S8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINGO3P0C6S8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINGO3P0C6S8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINGO3P0C6S8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
LINGO3P0C6S8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LINGO3P0C6S8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LINGO3P0C6S8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINGO3P0C6S8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.21■□□□□ 0.83
LINGO3P0C6S8 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.21■□□□□ 0.83
LINGO3P0C6S8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINGO3P0C6S8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.21■□□□□ 0.83
LINGO3P0C6S8 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LINGO3P0C6S8 AC006455.2-201ENST00000429931 906 ntBASIC20.21■□□□□ 0.83
LINGO3P0C6S8 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LINGO3P0C6S8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.21■□□□□ 0.83
LINGO3P0C6S8 AC092171.4-201ENST00000609130 632 ntBASIC20.21■□□□□ 0.83
LINGO3P0C6S8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LINGO3P0C6S8 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
LINGO3P0C6S8 AC098818.2-201ENST00000564925 2320 ntBASIC20.21■□□□□ 0.83
LINGO3P0C6S8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
LINGO3P0C6S8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.21■□□□□ 0.83
LINGO3P0C6S8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINGO3P0C6S8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 PCDHAC2-203ENST00000615316 3011 ntBASIC20.2■□□□□ 0.82
LINGO3P0C6S8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LINGO3P0C6S8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LINGO3P0C6S8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.19■□□□□ 0.82
LINGO3P0C6S8 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LINGO3P0C6S8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINGO3P0C6S8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.19■□□□□ 0.82
LINGO3P0C6S8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINGO3P0C6S8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
LINGO3P0C6S8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINGO3P0C6S8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LINGO3P0C6S8 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
LINGO3P0C6S8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.19■□□□□ 0.82
LINGO3P0C6S8 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LINGO3P0C6S8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LINGO3P0C6S8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.19■□□□□ 0.82
LINGO3P0C6S8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINGO3P0C6S8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINGO3P0C6S8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINGO3P0C6S8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINGO3P0C6S8 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINGO3P0C6S8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
LINGO3P0C6S8 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
LINGO3P0C6S8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.18■□□□□ 0.82
LINGO3P0C6S8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LINGO3P0C6S8 AL499627.2-201ENST00000606283 725 ntBASIC20.18■□□□□ 0.82
LINGO3P0C6S8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINGO3P0C6S8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LINGO3P0C6S8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.18■□□□□ 0.82
LINGO3P0C6S8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LINGO3P0C6S8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINGO3P0C6S8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LINGO3P0C6S8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LINGO3P0C6S8 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.17■□□□□ 0.82
LINGO3P0C6S8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
LINGO3P0C6S8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.17■□□□□ 0.82
LINGO3P0C6S8 AC004687.1-201ENST00000579003 1625 ntBASIC20.17■□□□□ 0.82
LINGO3P0C6S8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINGO3P0C6S8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms