Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC26.95■■□□□ 1.91
SNRPA1P09661 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC26.95■■□□□ 1.9
SNRPA1P09661 AC091799.1-201ENST00000422823 811 ntBASIC26.95■■□□□ 1.9
SNRPA1P09661 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
SNRPA1P09661 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
SNRPA1P09661 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC26.95■■□□□ 1.9
SNRPA1P09661 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SNRPA1P09661 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SNRPA1P09661 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC26.95■■□□□ 1.9
SNRPA1P09661 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SNRPA1P09661 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SNRPA1P09661 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SNRPA1P09661 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SNRPA1P09661 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
SNRPA1P09661 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC26.95■■□□□ 1.9
SNRPA1P09661 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SNRPA1P09661 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SNRPA1P09661 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26.94■■□□□ 1.9
SNRPA1P09661 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
SNRPA1P09661 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC26.94■■□□□ 1.9
SNRPA1P09661 ISCU-212ENST00000547005 795 ntTSL 3 BASIC26.94■■□□□ 1.9
SNRPA1P09661 MYC-209ENST00000641252 345 ntBASIC26.94■■□□□ 1.9
SNRPA1P09661 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC26.94■■□□□ 1.9
SNRPA1P09661 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SNRPA1P09661 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
SNRPA1P09661 C11orf96-202ENST00000528572 1834 ntBASIC26.94■■□□□ 1.9
SNRPA1P09661 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
SNRPA1P09661 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC26.93■■□□□ 1.9
SNRPA1P09661 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNRPA1P09661 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNRPA1P09661 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
SNRPA1P09661 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC26.93■■□□□ 1.9
SNRPA1P09661 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
SNRPA1P09661 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNRPA1P09661 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
SNRPA1P09661 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.93■■□□□ 1.9
SNRPA1P09661 AC068473.5-201ENST00000616428 2072 ntBASIC26.93■■□□□ 1.9
SNRPA1P09661 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SNRPA1P09661 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
SNRPA1P09661 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SNRPA1P09661 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC26.92■■□□□ 1.9
SNRPA1P09661 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC26.92■■□□□ 1.9
SNRPA1P09661 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
SNRPA1P09661 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SNRPA1P09661 FAM201B-201ENST00000458407 597 ntBASIC26.92■■□□□ 1.9
SNRPA1P09661 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC26.92■■□□□ 1.9
SNRPA1P09661 RNA5SP413-201ENST00000516373 109 ntBASIC26.92■■□□□ 1.9
SNRPA1P09661 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC26.92■■□□□ 1.9
SNRPA1P09661 AC083880.1-201ENST00000608266 535 ntBASIC26.92■■□□□ 1.9
SNRPA1P09661 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
SNRPA1P09661 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC26.92■■□□□ 1.9
SNRPA1P09661 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SNRPA1P09661 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC26.91■■□□□ 1.9
SNRPA1P09661 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC26.91■■□□□ 1.9
SNRPA1P09661 AC245052.3-201ENST00000450182 901 ntBASIC26.91■■□□□ 1.9
SNRPA1P09661 RHEB-204ENST00000472642 900 ntTSL 3 BASIC26.91■■□□□ 1.9
SNRPA1P09661 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
SNRPA1P09661 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
SNRPA1P09661 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
SNRPA1P09661 NARF-205ENST00000412079 1760 ntTSL 5 BASIC26.91■■□□□ 1.9
SNRPA1P09661 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.91■■□□□ 1.9
SNRPA1P09661 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC26.91■■□□□ 1.9
SNRPA1P09661 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
SNRPA1P09661 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
SNRPA1P09661 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SNRPA1P09661 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
SNRPA1P09661 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
SNRPA1P09661 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC26.9■■□□□ 1.9
SNRPA1P09661 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC26.9■■□□□ 1.9
SNRPA1P09661 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC26.9■■□□□ 1.9
SNRPA1P09661 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC26.9■■□□□ 1.9
SNRPA1P09661 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SNRPA1P09661 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
SNRPA1P09661 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC26.9■■□□□ 1.9
SNRPA1P09661 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
SNRPA1P09661 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SNRPA1P09661 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
SNRPA1P09661 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
SNRPA1P09661 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SNRPA1P09661 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SNRPA1P09661 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
SNRPA1P09661 AC097658.1-201ENST00000475555 843 ntBASIC26.89■■□□□ 1.9
SNRPA1P09661 AC091874.3-201ENST00000512672 1195 ntBASIC26.89■■□□□ 1.9
SNRPA1P09661 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC26.89■■□□□ 1.9
SNRPA1P09661 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
SNRPA1P09661 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SNRPA1P09661 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
SNRPA1P09661 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
SNRPA1P09661 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
SNRPA1P09661 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC26.89■■□□□ 1.89
SNRPA1P09661 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC26.89■■□□□ 1.89
SNRPA1P09661 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC26.88■■□□□ 1.89
SNRPA1P09661 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SNRPA1P09661 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SNRPA1P09661 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
SNRPA1P09661 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SNRPA1P09661 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
SNRPA1P09661 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC26.88■■□□□ 1.89
SNRPA1P09661 BET1L-207ENST00000529614 560 ntTSL 5 BASIC26.88■■□□□ 1.89
SNRPA1P09661 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms