Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.81■■□□□ 1.08
CD48P09326 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CD48P09326 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD48P09326 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CD48P09326 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CD48P09326 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CD48P09326 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CD48P09326 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.8■■□□□ 1.08
CD48P09326 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CD48P09326 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CD48P09326 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.8■■□□□ 1.08
CD48P09326 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CD48P09326 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CD48P09326 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CD48P09326 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CD48P09326 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.8■■□□□ 1.08
CD48P09326 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.79■■□□□ 1.08
CD48P09326 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.79■■□□□ 1.08
CD48P09326 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CD48P09326 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CD48P09326 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CD48P09326 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CD48P09326 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.79■■□□□ 1.08
CD48P09326 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CD48P09326 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CD48P09326 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CD48P09326 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CD48P09326 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CD48P09326 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CD48P09326 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
CD48P09326 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CD48P09326 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CD48P09326 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CD48P09326 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.78■■□□□ 1.08
CD48P09326 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CD48P09326 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CD48P09326 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.78■■□□□ 1.08
CD48P09326 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.78■■□□□ 1.08
CD48P09326 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.78■■□□□ 1.08
CD48P09326 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CD48P09326 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CD48P09326 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CD48P09326 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CD48P09326 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CD48P09326 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD48P09326 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CD48P09326 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD48P09326 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CD48P09326 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CD48P09326 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CD48P09326 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CD48P09326 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CD48P09326 AC053503.5-201ENST00000601508 636 ntBASIC21.77■■□□□ 1.08
CD48P09326 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.77■■□□□ 1.08
CD48P09326 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
CD48P09326 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD48P09326 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD48P09326 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CD48P09326 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CD48P09326 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CD48P09326 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CD48P09326 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
CD48P09326 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
CD48P09326 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
CD48P09326 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
CD48P09326 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CD48P09326 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.76■■□□□ 1.07
CD48P09326 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CD48P09326 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC21.76■■□□□ 1.07
CD48P09326 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CD48P09326 AC079140.4-201ENST00000507448 529 ntBASIC21.76■■□□□ 1.07
CD48P09326 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.76■■□□□ 1.07
CD48P09326 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.76■■□□□ 1.07
CD48P09326 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CD48P09326 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.76■■□□□ 1.07
CD48P09326 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CD48P09326 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.76■■□□□ 1.07
CD48P09326 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD48P09326 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD48P09326 AC061975.6-201ENST00000579045 1553 ntBASIC21.75■■□□□ 1.07
CD48P09326 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD48P09326 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CD48P09326 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.75■■□□□ 1.07
CD48P09326 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.75■■□□□ 1.07
CD48P09326 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.75■■□□□ 1.07
CD48P09326 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.75■■□□□ 1.07
CD48P09326 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CD48P09326 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.74■■□□□ 1.07
CD48P09326 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CD48P09326 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD48P09326 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD48P09326 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CD48P09326 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.74■■□□□ 1.07
CD48P09326 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD48P09326 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD48P09326 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CD48P09326 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD48P09326 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CD48P09326 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CD48P09326 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms