Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HLA-DPB1P04440 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DPB1P04440 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DPB1P04440 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DPB1P04440 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.84■□□□□ 0.61
HLA-DPB1P04440 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.84■□□□□ 0.61
HLA-DPB1P04440 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DPB1P04440 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DPB1P04440 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DPB1P04440 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DPB1P04440 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HLA-DPB1P04440 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DPB1P04440 AL049796.1-201ENST00000565336 1766 ntBASIC18.83■□□□□ 0.61
HLA-DPB1P04440 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DPB1P04440 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
HLA-DPB1P04440 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DPB1P04440 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
HLA-DPB1P04440 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DPB1P04440 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
HLA-DPB1P04440 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HLA-DPB1P04440 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DPB1P04440 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-DPB1P04440 AC096631.2-201ENST00000436136 790 ntBASIC18.83■□□□□ 0.6
HLA-DPB1P04440 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DPB1P04440 AC079089.2-201ENST00000531211 1277 ntBASIC18.83■□□□□ 0.6
HLA-DPB1P04440 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.83■□□□□ 0.6
HLA-DPB1P04440 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.83■□□□□ 0.6
HLA-DPB1P04440 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.83■□□□□ 0.6
HLA-DPB1P04440 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
HLA-DPB1P04440 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HLA-DPB1P04440 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DPB1P04440 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.83■□□□□ 0.6
HLA-DPB1P04440 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
HLA-DPB1P04440 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HLA-DPB1P04440 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPB1P04440 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPB1P04440 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPB1P04440 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.82■□□□□ 0.6
HLA-DPB1P04440 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPB1P04440 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPB1P04440 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.82■□□□□ 0.6
HLA-DPB1P04440 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPB1P04440 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.82■□□□□ 0.6
HLA-DPB1P04440 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPB1P04440 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.82■□□□□ 0.6
HLA-DPB1P04440 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
HLA-DPB1P04440 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPB1P04440 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPB1P04440 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPB1P04440 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
HLA-DPB1P04440 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPB1P04440 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPB1P04440 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HLA-DPB1P04440 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPB1P04440 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPB1P04440 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPB1P04440 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPB1P04440 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPB1P04440 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-DPB1P04440 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-DPB1P04440 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPB1P04440 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPB1P04440 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPB1P04440 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPB1P04440 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPB1P04440 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
HLA-DPB1P04440 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPB1P04440 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPB1P04440 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
HLA-DPB1P04440 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HLA-DPB1P04440 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.81■□□□□ 0.6
HLA-DPB1P04440 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.81■□□□□ 0.6
HLA-DPB1P04440 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.81■□□□□ 0.6
HLA-DPB1P04440 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPB1P04440 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DPB1P04440 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPB1P04440 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-DPB1P04440 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DPB1P04440 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HLA-DPB1P04440 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
HLA-DPB1P04440 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DPB1P04440 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.8■□□□□ 0.6
HLA-DPB1P04440 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPB1P04440 OR7E47P-201ENST00000546390 1422 ntBASIC18.8■□□□□ 0.6
HLA-DPB1P04440 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.8■□□□□ 0.6
HLA-DPB1P04440 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPB1P04440 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
HLA-DPB1P04440 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPB1P04440 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPB1P04440 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPB1P04440 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HLA-DPB1P04440 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
HLA-DPB1P04440 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DPB1P04440 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.79■□□□□ 0.6
HLA-DPB1P04440 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HLA-DPB1P04440 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DPB1P04440 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DPB1P04440 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DPB1P04440 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HLA-DPB1P04440 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms