Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PDGFAP04085 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFAP04085 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.6■□□□□ 0.73
PDGFAP04085 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFAP04085 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.6■□□□□ 0.73
PDGFAP04085 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.6■□□□□ 0.73
PDGFAP04085 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.6■□□□□ 0.73
PDGFAP04085 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFAP04085 AC007375.3-201ENST00000600936 2314 ntBASIC19.6■□□□□ 0.73
PDGFAP04085 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFAP04085 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFAP04085 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.6■□□□□ 0.73
PDGFAP04085 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFAP04085 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.6■□□□□ 0.73
PDGFAP04085 ANOS2P-203ENST00000472227 1816 ntBASIC19.6■□□□□ 0.73
PDGFAP04085 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PDGFAP04085 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFAP04085 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.59■□□□□ 0.73
PDGFAP04085 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFAP04085 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFAP04085 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFAP04085 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PDGFAP04085 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.59■□□□□ 0.73
PDGFAP04085 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.59■□□□□ 0.73
PDGFAP04085 EEF1DP3-203ENST00000566025 782 ntBASIC19.59■□□□□ 0.73
PDGFAP04085 SLC7A5P1-201ENST00000568957 537 ntBASIC19.59■□□□□ 0.73
PDGFAP04085 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.59■□□□□ 0.73
PDGFAP04085 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.59■□□□□ 0.73
PDGFAP04085 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.59■□□□□ 0.73
PDGFAP04085 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.59■□□□□ 0.73
PDGFAP04085 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.59■□□□□ 0.73
PDGFAP04085 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFAP04085 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.59■□□□□ 0.73
PDGFAP04085 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFAP04085 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFAP04085 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFAP04085 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDGFAP04085 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.59■□□□□ 0.73
PDGFAP04085 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PDGFAP04085 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.58■□□□□ 0.73
PDGFAP04085 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDGFAP04085 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDGFAP04085 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
PDGFAP04085 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.58■□□□□ 0.72
PDGFAP04085 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDGFAP04085 AC016405.3-201ENST00000607710 860 ntBASIC19.58■□□□□ 0.72
PDGFAP04085 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDGFAP04085 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDGFAP04085 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDGFAP04085 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDGFAP04085 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.57■□□□□ 0.72
PDGFAP04085 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
PDGFAP04085 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.57■□□□□ 0.72
PDGFAP04085 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFAP04085 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFAP04085 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFAP04085 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.57■□□□□ 0.72
PDGFAP04085 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PDGFAP04085 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFAP04085 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFAP04085 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFAP04085 RPS2P52-201ENST00000469610 820 ntBASIC19.57■□□□□ 0.72
PDGFAP04085 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.57■□□□□ 0.72
PDGFAP04085 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDGFAP04085 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PDGFAP04085 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFAP04085 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PDGFAP04085 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFAP04085 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PDGFAP04085 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFAP04085 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFAP04085 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.56■□□□□ 0.72
PDGFAP04085 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.56■□□□□ 0.72
PDGFAP04085 AC007322.4-201ENST00000509611 723 ntBASIC19.56■□□□□ 0.72
PDGFAP04085 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.56■□□□□ 0.72
PDGFAP04085 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
PDGFAP04085 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.56■□□□□ 0.72
PDGFAP04085 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PDGFAP04085 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.56■□□□□ 0.72
PDGFAP04085 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFAP04085 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFAP04085 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDGFAP04085 LINC00526-201ENST00000581067 1875 ntBASIC19.56■□□□□ 0.72
PDGFAP04085 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PDGFAP04085 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PDGFAP04085 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFAP04085 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFAP04085 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFAP04085 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFAP04085 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.55■□□□□ 0.72
PDGFAP04085 AC098590.1-201ENST00000468126 897 ntBASIC19.55■□□□□ 0.72
PDGFAP04085 RARRES2P4-201ENST00000514074 484 ntBASIC19.55■□□□□ 0.72
PDGFAP04085 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.55■□□□□ 0.72
PDGFAP04085 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFAP04085 AC092118.2-201ENST00000613495 667 ntBASIC19.55■□□□□ 0.72
PDGFAP04085 OR10C1-204ENST00000622521 1039 ntBASIC19.55■□□□□ 0.72
PDGFAP04085 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PDGFAP04085 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFAP04085 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDGFAP04085 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms