Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
OPN1SWP03999 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
OPN1SWP03999 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.6■□□□□ 0.73
OPN1SWP03999 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.6■□□□□ 0.73
OPN1SWP03999 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.6■□□□□ 0.73
OPN1SWP03999 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
OPN1SWP03999 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.6■□□□□ 0.73
OPN1SWP03999 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.6■□□□□ 0.73
OPN1SWP03999 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
OPN1SWP03999 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.6■□□□□ 0.73
OPN1SWP03999 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
OPN1SWP03999 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
OPN1SWP03999 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.6■□□□□ 0.73
OPN1SWP03999 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.6■□□□□ 0.73
OPN1SWP03999 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
OPN1SWP03999 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
OPN1SWP03999 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
OPN1SWP03999 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
OPN1SWP03999 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
OPN1SWP03999 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
OPN1SWP03999 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.59■□□□□ 0.73
OPN1SWP03999 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
OPN1SWP03999 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.59■□□□□ 0.73
OPN1SWP03999 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.59■□□□□ 0.73
OPN1SWP03999 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
OPN1SWP03999 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.59■□□□□ 0.73
OPN1SWP03999 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
OPN1SWP03999 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
OPN1SWP03999 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.59■□□□□ 0.73
OPN1SWP03999 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
OPN1SWP03999 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.58■□□□□ 0.73
OPN1SWP03999 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.58■□□□□ 0.73
OPN1SWP03999 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
OPN1SWP03999 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
OPN1SWP03999 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.58■□□□□ 0.73
OPN1SWP03999 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.58■□□□□ 0.73
OPN1SWP03999 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
OPN1SWP03999 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
OPN1SWP03999 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
OPN1SWP03999 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
OPN1SWP03999 FEM1AP1-201ENST00000431297 1995 ntBASIC19.58■□□□□ 0.73
OPN1SWP03999 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
OPN1SWP03999 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
OPN1SWP03999 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.58■□□□□ 0.72
OPN1SWP03999 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.58■□□□□ 0.72
OPN1SWP03999 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
OPN1SWP03999 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.58■□□□□ 0.72
OPN1SWP03999 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.58■□□□□ 0.72
OPN1SWP03999 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.58■□□□□ 0.72
OPN1SWP03999 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
OPN1SWP03999 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
OPN1SWP03999 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.58■□□□□ 0.72
OPN1SWP03999 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.58■□□□□ 0.72
OPN1SWP03999 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
OPN1SWP03999 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
OPN1SWP03999 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
OPN1SWP03999 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
OPN1SWP03999 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
OPN1SWP03999 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
OPN1SWP03999 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
OPN1SWP03999 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
OPN1SWP03999 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
OPN1SWP03999 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
OPN1SWP03999 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
OPN1SWP03999 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
OPN1SWP03999 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
OPN1SWP03999 UNC93B3-201ENST00000308076 687 ntBASIC19.57■□□□□ 0.72
OPN1SWP03999 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
OPN1SWP03999 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
OPN1SWP03999 BX842568.3-201ENST00000418104 571 ntBASIC19.57■□□□□ 0.72
OPN1SWP03999 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
OPN1SWP03999 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
OPN1SWP03999 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.57■□□□□ 0.72
OPN1SWP03999 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
OPN1SWP03999 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
OPN1SWP03999 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
OPN1SWP03999 AC092667.1-201ENST00000434301 2586 ntBASIC19.57■□□□□ 0.72
OPN1SWP03999 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
OPN1SWP03999 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
OPN1SWP03999 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
OPN1SWP03999 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
OPN1SWP03999 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
OPN1SWP03999 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
OPN1SWP03999 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.56■□□□□ 0.72
OPN1SWP03999 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
OPN1SWP03999 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
OPN1SWP03999 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
OPN1SWP03999 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
OPN1SWP03999 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
OPN1SWP03999 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
OPN1SWP03999 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
OPN1SWP03999 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
OPN1SWP03999 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
OPN1SWP03999 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
OPN1SWP03999 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
OPN1SWP03999 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.56■□□□□ 0.72
OPN1SWP03999 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
OPN1SWP03999 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.56■□□□□ 0.72
OPN1SWP03999 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.56■□□□□ 0.72
OPN1SWP03999 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms